BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034101
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   343   3e-92
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   321   1e-85
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   310   2e-82
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   308   1e-81
ref|NP_174678.2| pentatricopeptide repeat-containing protein [Ar...   288   1e-75

>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  343 bits (880), Expect = 3e-92
 Identities = 167/205 (81%), Positives = 184/205 (89%)
 Frame = +3

Query: 3   DGVLWQTLLGASKTYGNVEMAEKASRKLVEMGSSSSGDFVLLSNVYAAHERWKDVGTVRK 182
           D VLWQ+LLGA KTYGNVEMAE ASRKLVEMGS+S GDFVLLSNVYAA ERW+DVG VR+
Sbjct: 369 DVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVRE 428

Query: 183 AMKSKYVKKVPGFSYIEAGGVIHKFVNGDQRHCSRDQIYRKLDEISFRIKEYGYMAETSF 362
           AMKS+ V+KVPGFSYIE  GVIHKFVNGDQ H    +IY KLDEI FRIK +GY+AETS 
Sbjct: 429 AMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSL 488

Query: 363 VLHDIGEEEKENALCHHSEKLAVAYGLIATSEGSTIRVNKNIRICGDCHVVIKLISKIYE 542
           VLHDIGEE+KENALCHHSEKLAVA+GLI+TSEG+ IRVNKN+RICGDCHVVIKLISKIY+
Sbjct: 489 VLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIYD 548

Query: 543 REIIVRDRTRFHIFKEGSCSCRDYW 617
           +EIIVRDR RFH FK+GSCSCRDYW
Sbjct: 549 QEIIVRDRARFHRFKDGSCSCRDYW 573


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  321 bits (823), Expect = 1e-85
 Identities = 158/205 (77%), Positives = 176/205 (85%)
 Frame = +3

Query: 3   DGVLWQTLLGASKTYGNVEMAEKASRKLVEMGSSSSGDFVLLSNVYAAHERWKDVGTVRK 182
           D VLWQTLLGAS+T+ NVE+AE  SRKLVEMGS+  GDFVLLSNVYAA ERW DVG VR+
Sbjct: 374 DIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVRE 433

Query: 183 AMKSKYVKKVPGFSYIEAGGVIHKFVNGDQRHCSRDQIYRKLDEISFRIKEYGYMAETSF 362
           AMK++ VKKVPG SYIE  GVIHKF N D+ H S  +IY KLDEI FR+KEYGY+AETSF
Sbjct: 434 AMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSF 493

Query: 363 VLHDIGEEEKENALCHHSEKLAVAYGLIATSEGSTIRVNKNIRICGDCHVVIKLISKIYE 542
           VLHDIGEE+KEN L HHSEKLAVA+GLI+TSEG+ I+V KN+RICGDCH VIKLISKIY+
Sbjct: 494 VLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYD 553

Query: 543 REIIVRDRTRFHIFKEGSCSCRDYW 617
           REIIVRDR RFH FKEG CSCRDYW
Sbjct: 554 REIIVRDRVRFHRFKEGFCSCRDYW 578


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  310 bits (795), Expect = 2e-82
 Identities = 153/203 (75%), Positives = 171/203 (84%)
 Frame = +3

Query: 9   VLWQTLLGASKTYGNVEMAEKASRKLVEMGSSSSGDFVLLSNVYAAHERWKDVGTVRKAM 188
           VLWQTLLGA +TYG+VEMAE ASRKLVEMG  S GDFVLLSNVYAA +RW DVG VR AM
Sbjct: 374 VLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAM 433

Query: 189 KSKYVKKVPGFSYIEAGGVIHKFVNGDQRHCSRDQIYRKLDEISFRIKEYGYMAETSFVL 368
           + + VKK PGFSYIE  G ++KFVNGDQ H S  +IY KLDEI+ RIK YGY A+TS VL
Sbjct: 434 RRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVL 493

Query: 369 HDIGEEEKENALCHHSEKLAVAYGLIATSEGSTIRVNKNIRICGDCHVVIKLISKIYERE 548
           HDIG+E+KENALC+HSEKLAVA+GL  T EG+ I+V KN+RICGDCHVVIKLISKIY RE
Sbjct: 494 HDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIRE 553

Query: 549 IIVRDRTRFHIFKEGSCSCRDYW 617
           IIVRDRTRFH FKEG CSC+DYW
Sbjct: 554 IIVRDRTRFHRFKEGLCSCKDYW 576


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  308 bits (788), Expect = 1e-81
 Identities = 152/203 (74%), Positives = 170/203 (83%)
 Frame = +3

Query: 9   VLWQTLLGASKTYGNVEMAEKASRKLVEMGSSSSGDFVLLSNVYAAHERWKDVGTVRKAM 188
           VLWQTLLGA +TYG+VEMAE ASRKLVEMG  S G FVLLSNVYAA +RW DVG VR AM
Sbjct: 374 VLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAM 433

Query: 189 KSKYVKKVPGFSYIEAGGVIHKFVNGDQRHCSRDQIYRKLDEISFRIKEYGYMAETSFVL 368
           + + VKK PGFSYIE  G ++KFVNGDQ H S  +IY KLDEI+ RIK YGY A+TS VL
Sbjct: 434 RRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVL 493

Query: 369 HDIGEEEKENALCHHSEKLAVAYGLIATSEGSTIRVNKNIRICGDCHVVIKLISKIYERE 548
           HDIG+E+KENALC+HSEKLAVA+GL  T EG+ I+V KN+RICGDCHVVIKLISKIY RE
Sbjct: 494 HDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIRE 553

Query: 549 IIVRDRTRFHIFKEGSCSCRDYW 617
           IIVRDRTRFH FKEG CSC+DYW
Sbjct: 554 IIVRDRTRFHRFKEGLCSCKDYW 576


>ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g34160 gi|332193557|gb|AEE31678.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 581

 Score =  288 bits (737), Expect = 1e-75
 Identities = 142/208 (68%), Positives = 166/208 (79%), Gaps = 3/208 (1%)
 Frame = +3

Query: 3   DGVLWQTLLGASKTYGNVEMAEKASRKLVEMGSSSSGDFVLLSNVYAAHERWKDVGTVRK 182
           D VLWQ+LLGAS+ Y +VEMAE ASR++ EMG ++ GDFVLLSNVYAA  RWKDVG VR 
Sbjct: 374 DPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRD 433

Query: 183 AMKSKYVKKVPGFSYIEAGGVIHKFVNGDQRHCSRDQIYRKLDEISFRIKEYGYMAETSF 362
            M+SK VKK+PG SYIEA G IH+F N D+ H    +IY K+DEI F+I+E GY+A+T  
Sbjct: 434 DMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGL 493

Query: 363 VLHDIGEEEKENALCHHSEKLAVAYGLI---ATSEGSTIRVNKNIRICGDCHVVIKLISK 533
           VLHDIGEEEKENALC+HSEKLAVAYGL+      E S +RV  N+RICGDCHVV K ISK
Sbjct: 494 VLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISK 553

Query: 534 IYEREIIVRDRTRFHIFKEGSCSCRDYW 617
           IY+REIIVRDR RFH FK+GSCSCRD+W
Sbjct: 554 IYKREIIVRDRVRFHRFKDGSCSCRDFW 581