BLASTX nr result

ID: Bupleurum21_contig00034089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034089
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB77431.1| non-S-locus F-box-like protein 2011 [Petunia inte...   124   8e-27
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...   114   6e-24
ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cuc...   112   4e-23

>gb|ABB77431.1| non-S-locus F-box-like protein 2011 [Petunia integrifolia subsp.
           inflata]
          Length = 143

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/107 (57%), Positives = 79/107 (73%)
 Frame = -3

Query: 323 NIGNFDVLPEGCIADALSHTTPLDACRMTLVASNFRLIVDSDAVWERFLPSDYRELIARA 144
           N G+   LPEGCIA+ LS T+P+D CR++LVAS FR   DSDAVW+RFLP DYR++I+  
Sbjct: 9   NCGDIYQLPEGCIANVLSLTSPMDTCRLSLVASIFRSAADSDAVWDRFLPPDYRDIISGI 68

Query: 143 VQNHGHVHHLLDFSSKKKLYLHLSDHPCVIDGGSMSFSLDKWTGKKC 3
                    ++ F SKK+LYL+LSDHP +IDGG+ SFSL+K +GKKC
Sbjct: 69  GPG-----SIIGFGSKKELYLYLSDHPFLIDGGTKSFSLEKRSGKKC 110


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 GNFDVLPEGCIADALSHTTPLDACRMTLVASNFRLIVDSDAVWERFLPSDYRELIARAVQ 138
           G+   LPEGCIAD +S T P DACR++ V+S FR   +SD VWE+FLP DY  +I+R+  
Sbjct: 10  GSLMSLPEGCIADVVSFTGPFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSD 69

Query: 137 NHGHVHHLLD-FSSKKKLYLHLSDHPCVIDGGSMSFSLDKWTGKKC 3
           +      LLD FSSKK+LY  L D+P +ID G  SF+L+KW+GKKC
Sbjct: 70  S-----FLLDRFSSKKQLYFSLCDNPILIDDGKKSFALEKWSGKKC 110


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -3

Query: 311 FDVLPEGCIADALSHTTPLDACRMTLVASNFRLIVDSDAVWERFLPSDYRELIARAVQNH 132
           F  LPEGCIAD L+ T+P D CRM+ VAS F    +SDA+WERFLP+DYRE+IAR+ ++ 
Sbjct: 20  FSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESS 79

Query: 131 GHVHHLLDFSSKKKLYLHLSDHPCVIDGGSMSFSLDKWTGKKC 3
              H    FSSKK+LY  L D+P +ID G  SF L+K +GKKC
Sbjct: 80  SWRH----FSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKC 118


>ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 349

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -3

Query: 311 FDVLPEGCIADALSHTTPLDACRMTLVASNFRLIVDSDAVWERFLPSDYRELIARAVQNH 132
           F  LPEGCIAD L+ T+P D CRM+ VAS F    +SDA+WERFLP+DYRE+IAR+ ++ 
Sbjct: 20  FSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESS 79

Query: 131 GHVHHLLDFSSKKKLYLHLSDHPCVIDGGSMSFSLDKWTGKKC 3
              H    FSSKK+LY  L D+P +ID G  SF L+K +GKKC
Sbjct: 80  SWRH----FSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKC 118


>ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cucumis sativus]
           gi|449477769|ref|XP_004155117.1| PREDICTED: F-box
           protein At2g02240-like [Cucumis sativus]
          Length = 322

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/104 (53%), Positives = 69/104 (66%)
 Frame = -3

Query: 314 NFDVLPEGCIADALSHTTPLDACRMTLVASNFRLIVDSDAVWERFLPSDYRELIARAVQN 135
           +F  LPEGC++  LS T+P D CR   V+S FR   DSDA+W+RFLP DY + I+ A+  
Sbjct: 19  DFSALPEGCVSHILSFTSPQDVCRSASVSSTFRSAADSDALWDRFLPPDYADEISHALS- 77

Query: 134 HGHVHHLLDFSSKKKLYLHLSDHPCVIDGGSMSFSLDKWTGKKC 3
               H    FSSKK+LYLHL   P +I GG+ SFSLDK TGKKC
Sbjct: 78  ----HLFPPFSSKKQLYLHLCRFPVLIHGGAKSFSLDKKTGKKC 117


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