BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034086
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
gb|AFK35002.1| unknown [Lotus japonicus]                               74   9e-12
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...    74   1e-11
ref|XP_003596877.1| Pentatricopeptide repeat-containing protein ...    73   2e-11

>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 313

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -1

Query: 265 YIFSRTNRQPTFLYNSLIRGYNSIKLYEQSLYVFAQMISQRKVFDPNTLPTVLKACAGLS 86
           YIFS TNR+PTFLYNSLIRGY+S+ L+ QSL +F QM+   K  D  TLP VLK+C+GLS
Sbjct: 63  YIFSLTNRRPTFLYNSLIRGYSSLFLFSQSLSIFCQMLFAHKPIDCYTLPAVLKSCSGLS 122

Query: 85  YPRM 74
             R+
Sbjct: 123 ALRL 126


>ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 315

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = -1

Query: 262 IFSRTNRQPTFLYNSLIRGYNSIKLYEQSLYVFAQMISQRKVFDPNTLPTVLKACAGLSY 83
           +FS T RQPTFL+NSLIR Y+S+ L+ QSL +F QM+  RK FD +TLP VLK+CAGLS 
Sbjct: 65  LFSFTIRQPTFLFNSLIRAYSSLNLFSQSLCIFRQMLLARKPFDRHTLPVVLKSCAGLSA 124

Query: 82  PRM 74
            R+
Sbjct: 125 LRL 127


>gb|AFK35002.1| unknown [Lotus japonicus]
          Length = 219

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = -1

Query: 262 IFSRTNRQPTFLYNSLIRGYNSIKLYEQSLYVFAQMISQRKVFDPNTLPTVLKACAGLSY 83
           +FS TNRQPTFL+NSLIR   S+ L+ QSL +F QM+   K FD  TLP VLK+CAGL+ 
Sbjct: 89  LFSFTNRQPTFLFNSLIRANASLNLFSQSLSLFRQMLRSWKPFDRQTLPVVLKSCAGLTA 148

Query: 82  PRM 74
            R+
Sbjct: 149 LRL 151


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = -1

Query: 262 IFSRTNRQPTFLYNSLIRGYNSIKLYEQSLYVFAQMISQRKVFDPNTLPTVLKACAGLSY 83
           +FS TNR+PTFLYNSLIR Y S+ L++++L +F +M    K FD +TLP VLK+CAGLS 
Sbjct: 65  LFSFTNRKPTFLYNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSA 124

Query: 82  PRM 74
            R+
Sbjct: 125 LRL 127


>ref|XP_003596877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240912|gb|ABD32770.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485925|gb|AES67128.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = -1

Query: 262 IFSRTNRQPTFLYNSLIRGYNSIKLYEQSLYVFAQMISQRKVFDPNTLPTVLKACAGLSY 83
           +FS TNR+PTFLYNSLIR Y S+ L++++L +F +M    K FD +TLP VLK+CAGLS 
Sbjct: 65  LFSFTNRKPTFLYNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSA 124

Query: 82  PRM 74
            R+
Sbjct: 125 LRL 127