BLASTX nr result

ID: Bupleurum21_contig00034077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034077
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510658.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_003527394.1| PREDICTED: DUF246 domain-containing protein ...    73   2e-11
ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_003523127.1| PREDICTED: DUF246 domain-containing protein ...    71   8e-11
emb|CBI37793.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002510658.1| conserved hypothetical protein [Ricinus communis]
           gi|223551359|gb|EEF52845.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
 Frame = +3

Query: 111 NRFRFLIPAISIISGVILLIFAFISFLAPSPVXXXXXXXXXXXXXY-----GDGGKVLFR 275
           N FR  +P IS +SGV+L+ F  +S LAPSP                    G+ G+ +F 
Sbjct: 12  NCFRSFLPLISAVSGVLLIFFGLLSILAPSPKISDNFHHSRHDYSSIKVADGESGESVFH 71

Query: 276 VPADGNIVDRDIWSSRNSQFFYGCSNA 356
           VP DG  +DRDIW+SRNS+F+YGCSNA
Sbjct: 72  VPRDGGRLDRDIWTSRNSKFYYGCSNA 98


>ref|XP_003527394.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 570

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 48/81 (59%)
 Frame = +3

Query: 114 RFRFLIPAISIISGVILLIFAFISFLAPSPVXXXXXXXXXXXXXYGDGGKVLFRVPADGN 293
           RFR +IP  S ++  +L +FA +SFLAPSPV                     FRVP+DG 
Sbjct: 13  RFRLMIPVFSAVAATLLFLFALLSFLAPSPVETDRIHRRRQHTSDEAIENSAFRVPSDGG 72

Query: 294 IVDRDIWSSRNSQFFYGCSNA 356
            + R+IWSSRNS+ F+GCSN+
Sbjct: 73  KLGRNIWSSRNSEHFHGCSNS 93


>ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|222857231|gb|EEE94778.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
 Frame = +3

Query: 114 RFRFLIPAISIISGVILLIFAFISFLAPSPVXXXXXXXXXXXXXYGD--------GGKVL 269
           RFR ++P IS +SGV+L++F  ++FLAP+P+               D         G+ +
Sbjct: 13  RFRSVLPLISAVSGVLLILFGLLTFLAPAPIDTNNPHHKNLMYTANDVVEDTIGKPGEPV 72

Query: 270 FRVPADGNIVDRDIWSSRNSQFFYGCSNA 356
             +P  G   DRD+WSSRNS++FYGCSNA
Sbjct: 73  LHIPIKGR-KDRDVWSSRNSKYFYGCSNA 100


>ref|XP_003523127.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 568

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/81 (43%), Positives = 45/81 (55%)
 Frame = +3

Query: 114 RFRFLIPAISIISGVILLIFAFISFLAPSPVXXXXXXXXXXXXXYGDGGKVLFRVPADGN 293
           RFR +IP  S ++  +  +FA +SFLAPSPV                     FRVP DG 
Sbjct: 13  RFRHMIPVFSAVAAALFFLFALLSFLAPSPVETDRIHRRRQHTSDDAIDNPAFRVPGDGG 72

Query: 294 IVDRDIWSSRNSQFFYGCSNA 356
            + RDIWSS NS+ F+GCSN+
Sbjct: 73  KLGRDIWSSLNSEHFFGCSNS 93


>emb|CBI37793.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
 Frame = +3

Query: 111 NRFRFLIPAISIISGVILLIFAFISFLAPSPVXXXXXXXXXXXXXYGD-------GGKVL 269
           +R R L P +S +SGVILL+FA  +FLAP+P+                          V+
Sbjct: 59  SRLRLLAPVVSAVSGVILLLFALFTFLAPAPISRNELLFRRNSSLSSGLEAQSSADRDVV 118

Query: 270 FRVPADGNIVDRDIWSSRNSQFFYGCSNA 356
           FRVPA G  +  D+W+SR S+F+YGCSNA
Sbjct: 119 FRVPATGGSLGNDMWTSRLSKFYYGCSNA 147


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