BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034055
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   151   6e-35
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/119 (64%), Positives = 88/119 (73%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           NV A NTLIAGRAQ G  E  LDQY++MKM GFRPDKITFVSV+SSC+ELAT+GQGQQIH
Sbjct: 249 NVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIH 308

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRG 77
           A+ +K                 SRCGCL+ S+K FLE E+ DVV W+SMIAAYGFHGRG
Sbjct: 309 AEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRG 367



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/117 (29%), Positives = 49/117 (41%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           NVA  N ++AG  Q   +E  L  +  M   GF PD+    SVL  CA L  +  G+Q+H
Sbjct: 148 NVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVH 207

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHG 83
               K                  +CG L +  +    M   +VV W ++IA    +G
Sbjct: 208 GYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNG 264


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/119 (64%), Positives = 88/119 (73%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           NV A NTLIAGRAQ G  E  LDQY++MKM GFRPDKITFVSV+SSC+ELAT+GQGQQIH
Sbjct: 249 NVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIH 308

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRG 77
           A+ +K                 SRCGCL+ S+K FLE E+ DVV W+SMIAAYGFHGRG
Sbjct: 309 AEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRG 367



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/117 (29%), Positives = 49/117 (41%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           NVA  N ++AG  Q   +E  L  +  M   GF PD+    SVL  CA L  +  G+Q+H
Sbjct: 148 NVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVH 207

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHG 83
               K                  +CG L +  +    M   +VV W ++IA    +G
Sbjct: 208 GYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNG 264


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/120 (60%), Positives = 89/120 (74%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           N+ A NTLIAG++Q G SE  LD Y++M++ GFRPDKITF SV+SSC+EL T+GQGQQIH
Sbjct: 154 NIVAWNTLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQGQQIH 213

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRGK 74
           A+ +K                 SRCGCL+DSVK FLE +D DV+LW+SMIAAYGFHGRG+
Sbjct: 214 AEVIKAGASSVVAVTSSLISMYSRCGCLEDSVKVFLECKDVDVILWSSMIAAYGFHGRGE 273



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/120 (27%), Positives = 54/120 (45%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           NVA  N ++AG  Q  ++E  L+ +  M   GF PD+ T  SVL  CA L ++  G+Q+H
Sbjct: 53  NVATWNAVVAGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVH 112

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRGK 74
              +K                  + G L +  +    M   ++V W ++IA    +G  +
Sbjct: 113 CYVVKCGFEFNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSE 172


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/119 (62%), Positives = 90/119 (75%)
 Frame = -3

Query: 430 VAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIHA 251
           V A NTLIAG+AQ G  E  L+QY++MKM GFRPDKITFVSVLS+C+ELAT+GQGQQIHA
Sbjct: 260 VVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHA 319

Query: 250 DALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRGK 74
           + +K                 SR GCL+DS+KAF++ E+ DVVLW+SMIAAYGFHGRG+
Sbjct: 320 EVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGE 378



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/117 (32%), Positives = 52/117 (44%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           N+A  N +IAG  Q   ++ AL  +  M   GF PD+ T  SVL  CA L ++  GQ++H
Sbjct: 158 NIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHG 83
           A  LK                  + G L D  K    M    VV W ++IA    +G
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNG 274


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/120 (59%), Positives = 90/120 (75%)
 Frame = -3

Query: 433 NVAACNTLIAGRAQQGLSEGALDQYHLMKMTGFRPDKITFVSVLSSCAELATIGQGQQIH 254
           ++ A NTL++G+AQ+G  EG LDQY +MKM GFRPDKITFVSV+SSC+ELA + QG+QIH
Sbjct: 266 SLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIH 325

Query: 253 ADALKXXXXXXXXXXXXXXXXXSRCGCLDDSVKAFLEMEDTDVVLWTSMIAAYGFHGRGK 74
           A+A+K                 SRCGCL DS+K FLE ++ DVVLW+SMIAAYGFHG+G+
Sbjct: 326 AEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGE 385