BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034050
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   159   3e-37
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                156   1e-36
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   155   2e-36
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   154   7e-36
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   154   7e-36

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/154 (50%), Positives = 103/154 (66%)
 Frame = +1

Query: 7    ILSFFHYHQLPRIINATAIALIPKCNTPTSMADFRPISCCNVLYKCISKILPTRLRLVLN 186
            I SFF    LP+ +NAT +ALIPK +    M D+RPISCCNVLYK ISKIL  RL+L+L 
Sbjct: 793  IQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLP 852

Query: 187  DIISPCQSAFVPQRCIGDNVMLAQSLCRNYHLSSGQPRCTLKLDITKAFDSVSWAFLFDA 366
              I   QSAFV +R + +NV+LA  L ++YH  S  PRC +K+DI+KAFDSV W FL + 
Sbjct: 853  SFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNT 912

Query: 367  MHAMGFPALFIKWIKTCVTGCMYSIKINGGFRRF 468
            + A+ FP  F  WIK C++   +S+++NG    F
Sbjct: 913  LEALNFPETFRHWIKLCISTATFSVQVNGELAGF 946


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/154 (49%), Positives = 104/154 (67%)
 Frame = +1

Query: 7   ILSFFHYHQLPRIINATAIALIPKCNTPTSMADFRPISCCNVLYKCISKILPTRLRLVLN 186
           I SFF    LP+ +NAT +ALIPK +  T M D+RPISCCNV+YK ISKI+  RL+++L 
Sbjct: 69  IKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLP 128

Query: 187 DIISPCQSAFVPQRCIGDNVMLAQSLCRNYHLSSGQPRCTLKLDITKAFDSVSWAFLFDA 366
             I   QSAFV +R + +NV+LA  L ++YH  S  PRC +K+DI+KAFDSV W FL + 
Sbjct: 129 TFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNT 188

Query: 367 MHAMGFPALFIKWIKTCVTGCMYSIKINGGFRRF 468
           + A+ FP  F  WIK C++   +S+++NG    F
Sbjct: 189 LEALNFPENFCHWIKLCISTATFSVQVNGELAGF 222


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/149 (47%), Positives = 101/149 (67%)
 Frame = +1

Query: 7    ILSFFHYHQLPRIINATAIALIPKCNTPTSMADFRPISCCNVLYKCISKILPTRLRLVLN 186
            I SFF Y  LP+ +N+T +ALIPK      M D+RPISCCNVLYK ISK+L  RL+ +L 
Sbjct: 762  IKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLP 821

Query: 187  DIISPCQSAFVPQRCIGDNVMLAQSLCRNYHLSSGQPRCTLKLDITKAFDSVSWAFLFDA 366
            + I+P QSAF+  R + +N++LA  L ++YH     PRC +K+D++KAFDSV W FL + 
Sbjct: 822  EFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNT 881

Query: 367  MHAMGFPALFIKWIKTCVTGCMYSIKING 453
            + A+  P  FI WI  C++   +S+++NG
Sbjct: 882  LAALDIPEKFIHWINLCISTASFSVQVNG 910


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/151 (47%), Positives = 99/151 (65%)
 Frame = +1

Query: 1   KGILSFFHYHQLPRIINATAIALIPKCNTPTSMADFRPISCCNVLYKCISKILPTRLRLV 180
           +GIL FF    + + IN TA+ LIPK +      D+RPI+CC+ LYK ISKIL  RL+ V
Sbjct: 482 EGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAV 541

Query: 181 LNDIISPCQSAFVPQRCIGDNVMLAQSLCRNYHLSSGQPRCTLKLDITKAFDSVSWAFLF 360
           + +++   Q+ F+P+R IGDN++LA  L R Y+     PRC +K+DI KA+DSV W FL 
Sbjct: 542 ITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLE 601

Query: 361 DAMHAMGFPALFIKWIKTCVTGCMYSIKING 453
             +  +GFP++FI+WI  CV    YSI +NG
Sbjct: 602 SMLKELGFPSMFIRWIMACVKTVSYSILLNG 632


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/149 (51%), Positives = 98/149 (65%)
 Frame = +1

Query: 7   ILSFFHYHQLPRIINATAIALIPKCNTPTSMADFRPISCCNVLYKCISKILPTRLRLVLN 186
           I SFF    LP+ IN+T +ALIPK      M D+RPISCCNVLYK ISKI+  RL+LVL 
Sbjct: 384 IQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLP 443

Query: 187 DIISPCQSAFVPQRCIGDNVMLAQSLCRNYHLSSGQPRCTLKLDITKAFDSVSWAFLFDA 366
             I   QSAFV  R + +NV+LA  + ++YH  S   RC LK+DI+KAFDSV W FL + 
Sbjct: 444 KFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINV 503

Query: 367 MHAMGFPALFIKWIKTCVTGCMYSIKING 453
           + AM FP  F  WI  C+T   +S+++NG
Sbjct: 504 LEAMNFPPEFTHWITLCITTASFSVQVNG 532