BLASTX nr result
ID: Bupleurum21_contig00034042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00034042
(1445 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2... 637 e-180
ref|NP_567055.1| glycoside hydrolase family 28 protein / polygal... 604 e-170
emb|CAB41176.1| putative protein [Arabidopsis thaliana] 604 e-170
ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arab... 602 e-170
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas... 601 e-169
>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
predicted protein [Populus trichocarpa]
Length = 445
Score = 637 bits (1643), Expect = e-180
Identities = 298/431 (69%), Positives = 346/431 (80%), Gaps = 3/431 (0%)
Frame = +2
Query: 158 SVADYGTVGDGIHYDTAQIQAAIDDCSSHGGGR---VIFPPGTYLTATIFLKSGVVLEVQ 328
SV D+G +GDGIHYDT IQ+ I+ C + + V FPPG YLTATI LKS VVL +Q
Sbjct: 14 SVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGIYLTATIHLKSNVVLNIQ 73
Query: 329 KNATILGGTRLEDYPAENKRWYVVVAEEAXXXXXXXXXXXXXXXLKFVKRFDEKKNVMIS 508
+ AT+LGGT+LEDYP E RWYVV+AE A LKFVKRF+E+KNVM+S
Sbjct: 74 EGATLLGGTKLEDYPKEFNRWYVVLAENASDVGITGGGVVDGQGLKFVKRFNERKNVMVS 133
Query: 509 WNETGACLGDECRPRLVGFIRSKNVEIWNVNFTHPAYWCLHLVQCNNTSIHDVSIYGDFN 688
WN TGACLGDECRPRLVGFI NV++WNV + PAYWCLH+VQC NT I DVSIYGDFN
Sbjct: 134 WNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIYGDFN 193
Query: 689 TPXXXXXXXXXXXXTLITRCNINTGDDAICPKTYEGALYNLTATNCWIQTKSSAIKLGSA 868
+P TLITRC+I+TGDDAICPKTY G +YNLTAT+CWI+TKSSAIKLGSA
Sbjct: 194 SPNNDGIDIEDSNNTLITRCHIDTGDDAICPKTYTGPIYNLTATDCWIRTKSSAIKLGSA 253
Query: 869 SWFDFKGLVFDNITIVESHRGLGLQIRDGGNVSDVTFSNINITTRYYDPSWWGRAEPIYV 1048
SWF+FKGLVFDNITIV+SHRGLGLQIRDGGNVSD+TFSNINI+TRYYDPSWWGRAEPIYV
Sbjct: 254 SWFEFKGLVFDNITIVDSHRGLGLQIRDGGNVSDITFSNINISTRYYDPSWWGRAEPIYV 313
Query: 1049 TTCPRNEDSKSGSISNILFVNITATSENGVFLSGCKGGILSNLKFMNVNLTYRRWTNYMD 1228
TTCPR+ SK GSISN+ F+NIT SENGVFLSG KGG+LSNL+F+N+NLT+RRWT Y
Sbjct: 314 TTCPRHSSSKEGSISNLQFINITTNSENGVFLSGSKGGLLSNLRFINMNLTFRRWTTYPG 373
Query: 1229 GLIDYRPGCQGLVNHSSAGFLMEHIDGLEAVNVNMRWSEDHSGRWNTPLDFKPSSVNNIT 1408
GL+DYRPGCQGLVNHS+AG +MEHI+G E NVNMRWS+ + W+ PLDF+PS+VNNI+
Sbjct: 374 GLVDYRPGCQGLVNHSAAGIIMEHIEGFEVENVNMRWSDYQNEPWDNPLDFRPSTVNNIS 433
Query: 1409 LINLHSGLFKQ 1441
+N HS L+KQ
Sbjct: 434 FLNFHSALYKQ 444
>ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase)
family protein [Arabidopsis thaliana]
gi|332646180|gb|AEE79701.1| glycoside hydrolase family 28
protein / polygalacturonase (pectinase) family protein
[Arabidopsis thaliana]
Length = 490
Score = 604 bits (1558), Expect = e-170
Identities = 287/446 (64%), Positives = 345/446 (77%), Gaps = 10/446 (2%)
Frame = +2
Query: 128 IELLRSNLLFSVADYGTVGDGIHYDTAQIQAAIDDCSSHGGG-----RVIFPPGTYLTAT 292
I+L +L SV D+G GDGI+YDT+ IQ+ ID C+ H RV+FP G YLTA
Sbjct: 26 IQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAK 85
Query: 293 IFLKSGVVLEVQKNATILGGTRLEDY-PAENKR-WYVVVAEEAXXXXXXXXXXXXXXXLK 466
+ L+SGV+L+V +NA +LGG R+EDY PAE WYVVVA A K
Sbjct: 86 LHLRSGVILDVTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSK 145
Query: 467 FVKRFDEKKNVMISWNETGACLGDECRPRLVGFIRSKNVEIWNVNFTHPAYWCLHLVQCN 646
FV RFDEKKNVM+SWN+TGACLGDECRPRLVGF+ S NVEIWN+ PAYWCLH+V+C
Sbjct: 146 FVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCE 205
Query: 647 NTSIHDVSIYGDFNTPXXXXXXXXXXXXTLITRCNINTGDDAICPKTYEGALYNLTATNC 826
NTS+HDVSI GDFNTP T+ITRC+I+TGDDAICPKTY G LYNLTAT+C
Sbjct: 206 NTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDC 265
Query: 827 WIQTKSSAIKLGSASWFDFKGLVFDNITIVESHRGLGLQIRDGGNVSDVTFSNINITTRY 1006
WI+TKSSAIKLGSASWFDFKGLVFDNITI ESHRGLG+QIRDGGNVSDVTFSNINI+TRY
Sbjct: 266 WIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDVTFSNINISTRY 325
Query: 1007 YDPSWWGRAEPIYVTTCPRNEDSKSGSISNILFVNITATSENGVFLSGCKGGILSNLKFM 1186
YDPSWWGRAEPIY+TTCPR+ +K GSISN+LFVNIT SENGVFLSG G+LS++KF
Sbjct: 326 YDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDSENGVFLSGSPNGLLSDIKFK 385
Query: 1187 NVNLTYRRWTNYMDGLIDYRPGCQGLVNH-SSAGFLMEHIDGLEAVNVNMRWSEDH--SG 1357
N+NLT+RRW+NY GL+DYRPGCQGLVNH +++G +MEH++G NV+++WS+D +
Sbjct: 386 NMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHVNGFRVENVDLKWSDDDDVNA 445
Query: 1358 RWNTPLDFKPSSVNNITLINLHSGLF 1435
WN PL+F+PS+VNN++ + SGL+
Sbjct: 446 AWNVPLEFRPSTVNNVSFVGFTSGLY 471
>emb|CAB41176.1| putative protein [Arabidopsis thaliana]
Length = 614
Score = 604 bits (1558), Expect = e-170
Identities = 287/446 (64%), Positives = 345/446 (77%), Gaps = 10/446 (2%)
Frame = +2
Query: 128 IELLRSNLLFSVADYGTVGDGIHYDTAQIQAAIDDCSSHGGG-----RVIFPPGTYLTAT 292
I+L +L SV D+G GDGI+YDT+ IQ+ ID C+ H RV+FP G YLTA
Sbjct: 26 IQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAK 85
Query: 293 IFLKSGVVLEVQKNATILGGTRLEDY-PAENKR-WYVVVAEEAXXXXXXXXXXXXXXXLK 466
+ L+SGV+L+V +NA +LGG R+EDY PAE WYVVVA A K
Sbjct: 86 LHLRSGVILDVTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSK 145
Query: 467 FVKRFDEKKNVMISWNETGACLGDECRPRLVGFIRSKNVEIWNVNFTHPAYWCLHLVQCN 646
FV RFDEKKNVM+SWN+TGACLGDECRPRLVGF+ S NVEIWN+ PAYWCLH+V+C
Sbjct: 146 FVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCE 205
Query: 647 NTSIHDVSIYGDFNTPXXXXXXXXXXXXTLITRCNINTGDDAICPKTYEGALYNLTATNC 826
NTS+HDVSI GDFNTP T+ITRC+I+TGDDAICPKTY G LYNLTAT+C
Sbjct: 206 NTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDC 265
Query: 827 WIQTKSSAIKLGSASWFDFKGLVFDNITIVESHRGLGLQIRDGGNVSDVTFSNINITTRY 1006
WI+TKSSAIKLGSASWFDFKGLVFDNITI ESHRGLG+QIRDGGNVSDVTFSNINI+TRY
Sbjct: 266 WIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDVTFSNINISTRY 325
Query: 1007 YDPSWWGRAEPIYVTTCPRNEDSKSGSISNILFVNITATSENGVFLSGCKGGILSNLKFM 1186
YDPSWWGRAEPIY+TTCPR+ +K GSISN+LFVNIT SENGVFLSG G+LS++KF
Sbjct: 326 YDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDSENGVFLSGSPNGLLSDIKFK 385
Query: 1187 NVNLTYRRWTNYMDGLIDYRPGCQGLVNH-SSAGFLMEHIDGLEAVNVNMRWSEDH--SG 1357
N+NLT+RRW+NY GL+DYRPGCQGLVNH +++G +MEH++G NV+++WS+D +
Sbjct: 386 NMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHVNGFRVENVDLKWSDDDDVNA 445
Query: 1358 RWNTPLDFKPSSVNNITLINLHSGLF 1435
WN PL+F+PS+VNN++ + SGL+
Sbjct: 446 AWNVPLEFRPSTVNNVSFVGFTSGLY 471
>ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata] gi|297324010|gb|EFH54431.1| hypothetical protein
ARALYDRAFT_324272 [Arabidopsis lyrata subsp. lyrata]
Length = 589
Score = 602 bits (1552), Expect = e-170
Identities = 285/436 (65%), Positives = 340/436 (77%), Gaps = 8/436 (1%)
Frame = +2
Query: 128 IELLRSNLLFSVADYGTVGDGIHYDTAQIQAAIDDCSSHGGG-----RVIFPPGTYLTAT 292
I+L +L SV D+G GDGI+YDT+ +Q+ ID C+ H RV FP G YLTA
Sbjct: 25 IQLPGDSLALSVTDFGATGDGINYDTSAVQSTIDACNRHYTSSSSICRVTFPSGNYLTAK 84
Query: 293 IFLKSGVVLEVQKNATILGGTRLEDY-PAENKR-WYVVVAEEAXXXXXXXXXXXXXXXLK 466
+ L+SGVVL+V +NA +LGG R+EDY PAE WYVVVA A K
Sbjct: 85 LHLRSGVVLDVTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSK 144
Query: 467 FVKRFDEKKNVMISWNETGACLGDECRPRLVGFIRSKNVEIWNVNFTHPAYWCLHLVQCN 646
FV RFDEKKNVM+SWN+TGACLGDECRPRLVGF+ S+NVEIWN+ PAYWCLH+V+C
Sbjct: 145 FVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSRNVEIWNITLREPAYWCLHIVRCE 204
Query: 647 NTSIHDVSIYGDFNTPXXXXXXXXXXXXTLITRCNINTGDDAICPKTYEGALYNLTATNC 826
NTS+HDVSI GDFNTP T+ITRC+I+TGDDAICPKTY G LYNLTAT+C
Sbjct: 205 NTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDC 264
Query: 827 WIQTKSSAIKLGSASWFDFKGLVFDNITIVESHRGLGLQIRDGGNVSDVTFSNINITTRY 1006
WI+TKSSAIKLGSASWFDFKGLVFDNITI ESHRGLG+QIRDGGNVSD+TFSNINI+TRY
Sbjct: 265 WIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDITFSNINISTRY 324
Query: 1007 YDPSWWGRAEPIYVTTCPRNEDSKSGSISNILFVNITATSENGVFLSGCKGGILSNLKFM 1186
YDPSWWGRAEPIY+TTCPR+ +K GSISN+LFVNIT SENGVFLSG G+LS++KF
Sbjct: 325 YDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITINSENGVFLSGSPNGLLSDIKFK 384
Query: 1187 NVNLTYRRWTNYMDGLIDYRPGCQGLVNHS-SAGFLMEHIDGLEAVNVNMRWSEDHSGRW 1363
N+NLT RRW+NY GL+DYRPGC+GLVNHS +AG +MEH++G NV+++WS+D + W
Sbjct: 385 NMNLTVRRWSNYSAGLVDYRPGCRGLVNHSATAGIIMEHVNGFSIENVDLKWSDDLNSGW 444
Query: 1364 NTPLDFKPSSVNNITL 1411
N PL+F+PS+VNN++L
Sbjct: 445 NVPLEFRPSTVNNVSL 460
>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
Length = 463
Score = 601 bits (1549), Expect = e-169
Identities = 281/440 (63%), Positives = 338/440 (76%), Gaps = 1/440 (0%)
Frame = +2
Query: 113 SASPIIELLRSNLLFSVADYGTVGDGIHYDTAQIQAAIDDCSSHGGGRVIFPPGTYLTAT 292
SA P I LLR + FSV D+G +GDG+HYDT IQ+AI+ C + V FPPGTYLTAT
Sbjct: 20 SAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPAPSRCYVTFPPGTYLTAT 79
Query: 293 IFLKSGVVLEVQKNATILGGTRLEDYPAENKRWYVVVAEEAXXXXXXXXXXXXXXXLKFV 472
I+L+SGVVL++Q AT+L GT++EDYPA++ RW+ VVAE A LKFV
Sbjct: 80 IWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASDVGISGGGTVDGQGLKFV 139
Query: 473 KRFDEKKNVMISWNETGACLGDECRPRLVGFIRSKNVEIWNVNFTHPAYWCLHLVQCNNT 652
++FD++KNVM+SWN+TGAC GDECRP LVGFI S V + NV+F PA+WCLHLV+C NT
Sbjct: 140 EKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQPAHWCLHLVRCENT 199
Query: 653 SIHDVSIYGDFNTPXXXXXXXXXXXXTLITRCNINTGDDAICPKTYEGALYNLTATNCWI 832
I DVSIYGDF+TP TLITRC I+TGDDAICPK+ G ++NLTATNCWI
Sbjct: 200 VIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGPVFNLTATNCWI 259
Query: 833 QTKSSAIKLGSASWFDFKGLVFDNITIVESHRGLGLQIRDGGNVSDVTFSNINITTRYYD 1012
+TKSSAIKLGSASWF+F ++FDN+TIV+SHRGL Q+RDGG+ +D+TFSNINITTRYYD
Sbjct: 260 RTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGSANDITFSNINITTRYYD 319
Query: 1013 PSWWGRAEPIYVTTCPRNEDSKSGSISNILFVNITATSENGVFLSGCKGGILSNLKFMNV 1192
PSWWGRAEPIYVTTCPR+ SK GSISNI F+NITATSENGVFLSG K G+LSNL+F NV
Sbjct: 320 PSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKSGVLSNLRFTNV 379
Query: 1193 NLTYRRWTNYMDGLIDYRPGCQGLVNHSSAGFLMEHIDGLEAVNVNMRWSEDH-SGRWNT 1369
L Y+RWT Y G+ DYRPGCQG V H AG +MEHI+GL NV+M W + + S +WN
Sbjct: 380 KLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMHWFDTNGSLQWNN 439
Query: 1370 PLDFKPSSVNNITLINLHSG 1429
PLDF+PS+VNNI+ N HSG
Sbjct: 440 PLDFRPSTVNNISFFNFHSG 459