BLASTX nr result

ID: Bupleurum21_contig00034035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034035
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537812.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|NP_680449.1| uncharacterized protein [Arabidopsis thaliana] ...    81   8e-14
ref|NP_680750.1| uncharacterized protein [Arabidopsis thaliana] ...    81   8e-14
ref|XP_002866186.1| hypothetical protein ARALYDRAFT_495807 [Arab...    81   1e-13
ref|XP_003610035.1| hypothetical protein MTR_4g127190 [Medicago ...    80   2e-13

>ref|XP_002537812.1| conserved hypothetical protein [Ricinus communis]
           gi|223514986|gb|EEF24571.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 67

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
 Frame = +2

Query: 56  MCLI-LCEKEERELGRKTTFGNCPHCDGKVDAVDVETKSSCCFFIPLCFQIKRKFRCSVC 232
           MCL+ LCE+EERELGR+   G+CP+C GKV+A+DVE K S C F+P+C++IKRKF CS+C
Sbjct: 1   MCLVFLCEEEERELGRQQAPGSCPYCGGKVEAMDVERKWSFC-FLPICYKIKRKFFCSLC 59

Query: 233 SKHLVL 250
           ++ L L
Sbjct: 60  ARRLEL 65


>ref|NP_680449.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21618205|gb|AAM67255.1| unknown [Arabidopsis
           thaliana] gi|94807642|gb|ABF47118.1| At5g57123
           [Arabidopsis thaliana] gi|110739627|dbj|BAF01722.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332009467|gb|AED96850.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 67

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +2

Query: 56  MCLI-LCEKEERELGRKTTFGNCPHCDGKVDAVDVETKSSCCFFIPLCFQIKRKFRCSVC 232
           MCL+ LC++EE ELGR+   G+CP+C GKV  +DVE K   C F+PLCF+IKRK+ CS C
Sbjct: 1   MCLVCLCDEEETELGRQQAPGSCPYCGGKVQMLDVERKWMFC-FVPLCFKIKRKYSCSSC 59

Query: 233 SKHLVL 250
            + LVL
Sbjct: 60  DRRLVL 65


>ref|NP_680750.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15451058|gb|AAK96800.1| Unknown protein [Arabidopsis
           thaliana] gi|18377496|gb|AAL66914.1| unknown protein
           [Arabidopsis thaliana] gi|332660291|gb|AEE85691.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 67

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = +2

Query: 56  MCL-ILCEKEERELGRKTTFGNCPHCDGKVDAVDVETKSSCCFFIPLCFQIKRKFRCSVC 232
           MCL ++  +E+ ELGR+   G CP+C GKV AVD+ETK   C F+PLCF++KRK+ CS C
Sbjct: 1   MCLEVVYHEEKTELGRQQAPGMCPYCGGKVSAVDIETKWLFC-FLPLCFKVKRKYSCSSC 59

Query: 233 SKHLVLNY 256
            +HLVL Y
Sbjct: 60  ERHLVLYY 67


>ref|XP_002866186.1| hypothetical protein ARALYDRAFT_495807 [Arabidopsis lyrata subsp.
           lyrata] gi|297312021|gb|EFH42445.1| hypothetical protein
           ARALYDRAFT_495807 [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +2

Query: 56  MCLI-LCEKEERELGRKTTFGNCPHCDGKVDAVDVETKSSCCFFIPLCFQIKRKFRCSVC 232
           MCL+ LC++EE ELGR+   G+CP+C GKV  +DVE K   C F+PLCF+IKRK+ CS C
Sbjct: 1   MCLVCLCDEEETELGRQQAPGSCPYCGGKVQMLDVERKWMFC-FVPLCFKIKRKYLCSSC 59

Query: 233 SKHLVL 250
            + LVL
Sbjct: 60  DRRLVL 65


>ref|XP_003610035.1| hypothetical protein MTR_4g127190 [Medicago truncatula]
           gi|355511090|gb|AES92232.1| hypothetical protein
           MTR_4g127190 [Medicago truncatula]
          Length = 68

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/63 (52%), Positives = 50/63 (79%)
 Frame = +2

Query: 68  LCEKEERELGRKTTFGNCPHCDGKVDAVDVETKSSCCFFIPLCFQIKRKFRCSVCSKHLV 247
           +CE +++ELGR+   G+CP+C GKV+A+DVE +S  C F+P+CFQIKRK+ C++CS+ L 
Sbjct: 6   VCEGQQKELGRQQAPGSCPYCGGKVEAMDVEVQSKLC-FLPMCFQIKRKYFCTLCSRRLE 64

Query: 248 LNY 256
           + Y
Sbjct: 65  ILY 67


Top