BLASTX nr result

ID: Bupleurum21_contig00034022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034022
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]    89   4e-16
gb|AAO23078.1| polyprotein [Glycine max]                               87   2e-15
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...    84   9e-15
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                 83   3e-14
emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]          83   3e-14

>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/129 (40%), Positives = 66/129 (51%)
 Frame = -2

Query: 395  RIGTVAYEVDLPPTSRIHRVFHVSRLRRCIGDPTVSHIPLPALDDDDQPYLTPAEILDHR 216
            +IG VAY + LPPT+RIH VFHVS L+   G P V+ + LP L D+    L P +ILD R
Sbjct: 1179 KIGAVAYRLQLPPTARIHPVFHVSLLKSYNGTPAVTPLDLPPLADNGVITLEPQQILDTR 1238

Query: 215  TIWDDDMKKEQVLVQWPSSTPADSTWEDLDDIQCSYPHLFDXXXXXXXXXXXXSQGLEDK 36
             I   D   E+ LV W      ++TWE  D +   +PHL                 LEDK
Sbjct: 1239 WIKRGDTFMEESLVHWKHLPHEEATWESTDTLCHQFPHLM----------------LEDK 1282

Query: 35   APFNGAGID 9
             P +G G D
Sbjct: 1283 HPLHGVGND 1291


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/127 (37%), Positives = 68/127 (53%)
 Frame = -2

Query: 395  RIGTVAYEVDLPPTSRIHRVFHVSRLRRCIGDPTVSHIPLPALDDDDQPYLTPAEILDHR 216
            +IG VAY+++LP  +RIH VFHVS+L+   G     ++PLP    +  P + P +IL  R
Sbjct: 1391 KIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASR 1450

Query: 215  TIWDDDMKKEQVLVQWPSSTPADSTWEDLDDIQCSYPHLFDXXXXXXXXXXXXSQGLEDK 36
             I     + EQ+LVQW +    ++TWED++DI+ SYP                   LEDK
Sbjct: 1451 IIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTF----------------NLEDK 1494

Query: 35   APFNGAG 15
              F G G
Sbjct: 1495 VVFKGEG 1501


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/97 (40%), Positives = 59/97 (60%)
 Frame = -2

Query: 395  RIGTVAYEVDLPPTSRIHRVFHVSRLRRCIGDPTVSHIPLPALDDDDQPYLTPAEILDHR 216
            ++GTVAY +DLP +S IH V HVS+L++ +      H PLP LD  +  ++ PA+ILD R
Sbjct: 1481 KVGTVAYRLDLPSSSLIHPVVHVSQLKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRR 1540

Query: 215  TIWDDDMKKEQVLVQWPSSTPADSTWEDLDDIQCSYP 105
             I       EQ+ V+W    PA +TWE+  +++  +P
Sbjct: 1541 FIRKGSKLVEQIQVRWTGDAPAATTWENPQELRRRFP 1577


>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%)
 Frame = -2

Query: 395 RIGTVAYEVDLPPTSRIHRVFHVSRLRRCIGDPTVSHIPLPALDDDDQPYLTPAEILDHR 216
           +IGTVAY++ LP ++ IH VFHVS+L+  IG        LPA      P   P  ILD R
Sbjct: 458 KIGTVAYQLQLPSSTSIHPVFHVSQLKSAIGFTGPVQHQLPA---STAPLQVPLRILDRR 514

Query: 215 TIWDDDMKKEQVLVQWPSSTPADSTWEDLDDIQCSYP 105
                +    QVL+QW +S P D+TWEDLDD++  +P
Sbjct: 515 LTKRGNSAVAQVLIQWSASVPEDATWEDLDDLRSRFP 551


>emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]
          Length = 753

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%)
 Frame = -2

Query: 395 RIGTVAYEVDLPPTSRIHRVFHVSRLRRCIGDPTVSHIPLPALDDDDQPYLTPAEILDHR 216
           +IGTVAY++ LP ++ IH VFHVS+L+  IG        LPA      P   P  ILD R
Sbjct: 346 KIGTVAYQLQLPSSTSIHPVFHVSQLKSAIGFTGPVQHQLPA---STAPLQVPLRILDRR 402

Query: 215 TIWDDDMKKEQVLVQWPSSTPADSTWEDLDDIQCSYP 105
                +    QVL+QW +S P D+TWEDLDD++  +P
Sbjct: 403 LTKRGNSAVAQVLIQWSASVPEDATWEDLDDLRSRFP 439


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