BLASTX nr result

ID: Bupleurum21_contig00034009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034009
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740142.1| clp protease proteolytic subunit [Daucus carota...   115   4e-24
gb|ABU85179.1| clp protease proteolytic subunit [Anethum graveol...   114   9e-24
gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba ...   111   1e-22
ref|YP_007317273.1| ATP-dependent Clp protease proteolytic subun...   109   3e-22
ref|YP_004564028.1| ATP-dependent Clp protease proteolytic subun...   109   3e-22

>ref|YP_740142.1| clp protease proteolytic subunit [Daucus carota]
           gi|323149107|ref|YP_004222671.1| clp protease
           proteolytic subunit [Anthriscus cerefolium]
           gi|122239962|sp|Q0G9T7.1|CLPP_DAUCA RecName:
           Full=ATP-dependent Clp protease proteolytic subunit;
           AltName: Full=Endopeptidase Clp
           gi|113200932|gb|ABI32448.1| clp protease proteolytic
           subunit [Daucus carota] gi|289645600|gb|ADD13663.1| clp
           protease proteolytic subunit [Anthriscus cerefolium]
          Length = 197

 Score =  115 bits (289), Expect = 4e-24
 Identities = 60/76 (78%), Positives = 60/76 (78%)
 Frame = +3

Query: 276 RAMIHQPASSFYEAQTGEFIXXXXXXXXXXXXXXXVYVQRTDKPLWVVSEDMERDVFMSA 455
           R MIHQPASSFYEAQTGEFI               VYVQRTDKPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMSA 181

Query: 456 TEAQAYGIVDLVAVVE 503
           TEAQAYGIVDLVAVVE
Sbjct: 182 TEAQAYGIVDLVAVVE 197


>gb|ABU85179.1| clp protease proteolytic subunit [Anethum graveolens]
          Length = 197

 Score =  114 bits (286), Expect = 9e-24
 Identities = 59/76 (77%), Positives = 60/76 (78%)
 Frame = +3

Query: 276 RAMIHQPASSFYEAQTGEFIXXXXXXXXXXXXXXXVYVQRTDKPLWVVSEDMERDVFMSA 455
           R MIHQPASSFYEAQTGEFI               VYVQRTDKPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMSA 181

Query: 456 TEAQAYGIVDLVAVVE 503
           TEAQAYGIVD+VAVVE
Sbjct: 182 TEAQAYGIVDVVAVVE 197


>gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba japonica]
          Length = 198

 Score =  111 bits (277), Expect = 1e-22
 Identities = 58/75 (77%), Positives = 58/75 (77%)
 Frame = +3

Query: 273 IRAMIHQPASSFYEAQTGEFIXXXXXXXXXXXXXXXVYVQRTDKPLWVVSEDMERDVFMS 452
           IR MIHQPASSFYEAQTGEFI               VYVQRT KPLWVVSEDMERDVFMS
Sbjct: 123 IRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFMS 182

Query: 453 ATEAQAYGIVDLVAV 497
           ATEAQAYGIVDLVAV
Sbjct: 183 ATEAQAYGIVDLVAV 197


>ref|YP_007317273.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
           [Camellia sinensis] gi|430728297|gb|AGA55621.1|
           ATP-dependent Clp protease proteolytic subunit
           (chloroplast) [Camellia sinensis]
          Length = 195

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/74 (77%), Positives = 57/74 (77%)
 Frame = +3

Query: 276 RAMIHQPASSFYEAQTGEFIXXXXXXXXXXXXXXXVYVQRTDKPLWVVSEDMERDVFMSA 455
           R MIHQPASSFYEAQTGEFI               VYVQRT KPLWVVSEDMERDVFMSA
Sbjct: 121 RVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSA 180

Query: 456 TEAQAYGIVDLVAV 497
           TEAQAYGIVDLVAV
Sbjct: 181 TEAQAYGIVDLVAV 194


>ref|YP_004564028.1| ATP-dependent Clp protease proteolytic subunit [Olea woodiana
           subsp. woodiana] gi|334084683|emb|CBS29376.1|
           ATP-dependent Clp protease proteolytic subunit [Olea
           woodiana subsp. woodiana]
          Length = 196

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/74 (77%), Positives = 57/74 (77%)
 Frame = +3

Query: 276 RAMIHQPASSFYEAQTGEFIXXXXXXXXXXXXXXXVYVQRTDKPLWVVSEDMERDVFMSA 455
           R MIHQPASSFYEAQTGEFI               VYVQRT KPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSA 181

Query: 456 TEAQAYGIVDLVAV 497
           TEAQAYGIVDLVAV
Sbjct: 182 TEAQAYGIVDLVAV 195


Top