BLASTX nr result

ID: Bupleurum21_contig00034004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034004
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chlorop...   194   6e-48
ref|XP_002525990.1| protein with unknown function [Ricinus commu...   192   2e-47
emb|CBI26839.3| unnamed protein product [Vitis vinifera]              186   1e-45
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...   186   1e-45

>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  202 bits (513), Expect = 3e-50
 Identities = 103/138 (74%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
 Frame = -1

Query: 436 CLNFGRHRFDLIRYLSRKDIQVIAESGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCMLR 257
           CLNF R RF LIRY SRKDI VIA  GCPS+DRKVVNSGKRLRAHVGI+EG+VCSSC LR
Sbjct: 51  CLNFARDRFGLIRYFSRKDIGVIAGCGCPSIDRKVVNSGKRLRAHVGINEGHVCSSCNLR 110

Query: 256 GDCERAYVKAREDEWGRTVDVMRSVLTYGLDSITGLEENKPC-LNERVKQSVRRILKDLV 80
           GDCERAYVKAREDE GRTVDVMR +LTYGLD ++G  ENKPC  N+ VKQSVRR+LK+LV
Sbjct: 111 GDCERAYVKAREDEGGRTVDVMRILLTYGLDYVSGTVENKPCQKNKMVKQSVRRLLKELV 170

Query: 79  KLSMVELDDNIPKGSPSK 26
            LS  EL  ++P G P K
Sbjct: 171 GLSNDELVSDLPNGKPLK 188


>ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 528

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/131 (70%), Positives = 109/131 (83%)
 Frame = -1

Query: 436 CLNFGRHRFDLIRYLSRKDIQVIAESGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCMLR 257
           CLNFGR  F ++R+LSRKDI V    GCPSLDRKV+NSGKRLRA++GIDEGNVCSSC LR
Sbjct: 117 CLNFGRDHFHILRFLSRKDIGVTVALGCPSLDRKVINSGKRLRAYIGIDEGNVCSSCNLR 176

Query: 256 GDCERAYVKAREDEWGRTVDVMRSVLTYGLDSITGLEENKPCLNERVKQSVRRILKDLVK 77
           GDCERA+VKAREDE GRTVD+MR VLTYGLD I G  ENKPCL +RV++SVRR+LK++V+
Sbjct: 177 GDCERAFVKAREDEGGRTVDIMRIVLTYGLDPINGSVENKPCLTKRVEESVRRLLKEIVE 236

Query: 76  LSMVELDDNIP 44
            S  E + N P
Sbjct: 237 HSNKEENSNFP 247


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/145 (65%), Positives = 116/145 (80%)
 Frame = -1

Query: 436 CLNFGRHRFDLIRYLSRKDIQVIAESGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCMLR 257
           CLNF R +++LIR  SR+DI +IA  GCPS+DRKVVNSGKRLRAHVGIDEGNVCSSC LR
Sbjct: 135 CLNFARDQYELIRVFSRRDIHIIAGCGCPSIDRKVVNSGKRLRAHVGIDEGNVCSSCKLR 194

Query: 256 GDCERAYVKAREDEWGRTVDVMRSVLTYGLDSITGLEENKPCLNERVKQSVRRILKDLVK 77
           GDCERAYVKARE+E GRTVDVMR +LTYGLDSI+G  ENKPC N+ VK+SV+++LK++++
Sbjct: 195 GDCERAYVKARENEGGRTVDVMRILLTYGLDSISGTLENKPCQNKLVKESVKKLLKEMLE 254

Query: 76  LSMVELDDNIPKGSPSKWKSSMKES 2
            S  + D + P    SK   S+  S
Sbjct: 255 HSSQQHDFDPPNARLSKNVESLLHS 279


>emb|CBI26839.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  186 bits (473), Expect = 1e-45
 Identities = 92/145 (63%), Positives = 112/145 (77%)
 Frame = -1

Query: 436 CLNFGRHRFDLIRYLSRKDIQVIAESGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCMLR 257
           CL+F R RFDLI Y SRKDI+V+A SGCPS DRKVVNSGKRLRAHV IDEGNVCSSC+LR
Sbjct: 35  CLDFTRDRFDLISYFSRKDIEVVAGSGCPSTDRKVVNSGKRLRAHVDIDEGNVCSSCILR 94

Query: 256 GDCERAYVKAREDEWGRTVDVMRSVLTYGLDSITGLEENKPCLNERVKQSVRRILKDLVK 77
           G+CERAYV A E E GRTVD+MR +LTYGLD ITG  EN  C ++ +++S RR+LK +V+
Sbjct: 95  GNCERAYVMASEGEGGRTVDLMRILLTYGLDPITGTVENMLCRSKTIEESARRLLKAMVE 154

Query: 76  LSMVELDDNIPKGSPSKWKSSMKES 2
               E D  +P  + SK  +S++ES
Sbjct: 155 FGSKEFDSLLPNATSSKKVASLQES 179


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score =  186 bits (473), Expect = 1e-45
 Identities = 92/145 (63%), Positives = 112/145 (77%)
 Frame = -1

Query: 436 CLNFGRHRFDLIRYLSRKDIQVIAESGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCMLR 257
           CL+F R RFDLI Y SRKDI+V+A SGCPS DRKVVNSGKRLRAHV IDEGNVCSSC+LR
Sbjct: 121 CLDFTRDRFDLISYFSRKDIEVVAGSGCPSTDRKVVNSGKRLRAHVDIDEGNVCSSCILR 180

Query: 256 GDCERAYVKAREDEWGRTVDVMRSVLTYGLDSITGLEENKPCLNERVKQSVRRILKDLVK 77
           G+CERAYV A E E GRTVD+MR +LTYGLD ITG  EN  C ++ +++S RR+LK +V+
Sbjct: 181 GNCERAYVMASEGEGGRTVDLMRILLTYGLDPITGTVENMLCRSKTIEESARRLLKAMVE 240

Query: 76  LSMVELDDNIPKGSPSKWKSSMKES 2
               E D  +P  + SK  +S++ES
Sbjct: 241 FGSKEFDSLLPNATSSKKVASLQES 265


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