BLASTX nr result

ID: Bupleurum21_contig00034003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034003
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...    76   3e-12
ref|XP_004149945.1| PREDICTED: uncharacterized protein LOC101215...    73   2e-11
emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]    68   9e-10
ref|XP_003552855.1| PREDICTED: uncharacterized protein LOC100796...    61   1e-07
ref|XP_003518400.1| PREDICTED: uncharacterized protein LOC100816...    60   1e-07

>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 58/160 (36%), Positives = 71/160 (44%), Gaps = 43/160 (26%)
 Frame = +3

Query: 27  LPAEFLTDDDILTGELK-----------HIHQLPSEFPYDF------------------- 116
           LP+ FLTD+D L  +              IH  PSEFPY+F                   
Sbjct: 12  LPSHFLTDEDTLMDKENFNDNGANPVGAEIHGFPSEFPYEFDSFGSSSALNSPVESVMSS 71

Query: 117 ----ADRNDFCTELTRRLALSTLLNSNNKLHYSSSPDSEKKWSLSGSPQSIL-------- 260
               +D  D  T+L R+LA STL ++       SS + EK W LSGSPQS L        
Sbjct: 72  TETESDEEDLLTQLKRQLAHSTLHDTQKLAPSFSSENQEKTWVLSGSPQSTLSAVGNWSG 131

Query: 261 -SPVMSNGSPNLPFHGPSSPTAPFRLNHRSIDVISAAAGE 377
            S V SNGSPN      S PT P      + D+I AAAG+
Sbjct: 132 RSTVSSNGSPNGRSRVSSPPTTPLSEKTDAWDLIYAAAGQ 171


>ref|XP_004149945.1| PREDICTED: uncharacterized protein LOC101215147 [Cucumis sativus]
           gi|449513182|ref|XP_004164254.1| PREDICTED:
           uncharacterized LOC101215147 [Cucumis sativus]
          Length = 365

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
 Frame = +3

Query: 12  EASLCLPAEFLTDDDILTGELKHIHQLPSEFPYDFA------------------DRNDFC 137
           +++  LP  FL+D D L  +       P++FPYDF                   D  DF 
Sbjct: 4   DSTFYLPPHFLSDHDNLPPKPTSSALFPTDFPYDFTSSSVHSPVDSVLGDDDNDDEQDFL 63

Query: 138 TELTRRLALSTLLNSNNKLHYSSSPDSEKKWSLSGSPQSILS---------PVMSNGSPN 290
             LT+RL  STL +S       S   S+ K +++GSPQS LS          V S+GSPN
Sbjct: 64  AALTQRLTQSTLRDSQK---LPSVHKSQAKMAMAGSPQSTLSGVGSWSAWSSVSSDGSPN 120

Query: 291 LPFHGPSSPTAPFRLNHRSIDVISAAAGE 377
            P   PS PT PF   + + D+I AAAG+
Sbjct: 121 GPSLAPSPPTTPFGGENNTWDLIYAAAGQ 149


>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 58/170 (34%), Positives = 71/170 (41%), Gaps = 53/170 (31%)
 Frame = +3

Query: 27  LPAEFLTDDDILTGELK-----------HIHQLPSEFPYDF------------------- 116
           LP+ FLTD+D L  +              IH  PSEFPY+F                   
Sbjct: 12  LPSHFLTDEDXLMDKENFNDNGANPVGAEIHGFPSEFPYEFDSFGSSSALNSPVESVMSS 71

Query: 117 ----ADRNDFCTELTRRLALSTLLNSNNKLHYSSSPDSE----------KKWSLSGSPQS 254
               +D  D  T+L R+LA STL ++       SS + E          K W LSGSPQS
Sbjct: 72  TETESDEEDLLTQLKRQLAHSTLHDTQKLAPSFSSENQERADLGFVLTQKTWVLSGSPQS 131

Query: 255 ILSPV---------MSNGSPNLPFHGPSSPTAPFRLNHRSIDVISAAAGE 377
            LS V          SNGSPN      S PT P      + D+I AAAG+
Sbjct: 132 TLSAVGNWSGRSTVSSNGSPNGRSRVSSPPTTPLSEKTDAWDLIYAAAGQ 181


>ref|XP_003552855.1| PREDICTED: uncharacterized protein LOC100796164 [Glycine max]
          Length = 361

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 48/144 (33%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
 Frame = +3

Query: 12  EASLCLPAEFLTDDDILTGELKHIHQLPSEFPYDFA-------------DRNDFCTELTR 152
           +A LCLP +FL  D   T         PSEFPY+F                 DF   LTR
Sbjct: 3   DAGLCLPPQFLAGDTHRTLSNSDF-SFPSEFPYEFRVSSPPSTETESSDGEEDFLAGLTR 61

Query: 153 RLALSTLLNSNNKLHYSSSPDSEKKWSLSGSPQSIL---------SPVMSNGSPNLPFHG 305
           RL+ ++L  +  +    S    + +  L GSPQS L         S +   GSPN     
Sbjct: 62  RLSQTSLHEARKQFSTVSEIPRKTRQGLVGSPQSTLAGIGSWSGRSTISGEGSPNGYTRV 121

Query: 306 PSSPTAPFRLNHRSIDVISAAAGE 377
           PS  T PF  N+   +VI A AG+
Sbjct: 122 PSPSTMPFDENNDPWEVIYAVAGQ 145


>ref|XP_003518400.1| PREDICTED: uncharacterized protein LOC100816574 [Glycine max]
          Length = 382

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 34/129 (26%)
 Frame = +3

Query: 93  PSEFPYDF-----------------ADRNDFCTELTRRLALSTLLNSNNKLHY------S 203
           PSEFPY+F                 +D  DF   LTRRL+ ++L  +  + H+      S
Sbjct: 13  PSEFPYEFDSVGTEPVDSGSTGTESSDDEDFFAGLTRRLSHTSLNETRKEQHFTVPIGNS 72

Query: 204 SSPDSEKKWS--LSGSPQSILSPVMS---------NGSPNLPFHGPSSPTAPFRLNHRSI 350
              +S+K  +  L+GSPQSILS + S         +GSPN     PS  T PF+  + + 
Sbjct: 73  GQAESQKMMARGLAGSPQSILSGIGSWSGRSGGSGDGSPNGSSRVPSPTTTPFKSTNDAW 132

Query: 351 DVISAAAGE 377
           DV+ AAAGE
Sbjct: 133 DVLYAAAGE 141


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