BLASTX nr result

ID: Bupleurum21_contig00034001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034001
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633713.1| PREDICTED: probable serine/threonine-protein...    96   9e-25
emb|CBI33628.3| unnamed protein product [Vitis vinifera]               96   9e-25
ref|XP_002516765.1| wall-associated kinase, putative [Ricinus co...    92   1e-21
ref|XP_002527017.1| wall-associated kinase, putative [Ricinus co...    88   3e-21
emb|CAN62706.1| hypothetical protein VITISV_041559 [Vitis vinifera]    93   3e-21

>ref|XP_003633713.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Vitis vinifera]
          Length = 648

 Score = 95.5 bits (236), Expect(2) = 9e-25
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = -3

Query: 185 GMLQDGRVVAVKRLYENNFKRVEQFMNEVEILTKLNHKNLVNLYGCTSK*SREL 24
           G LQDGRVVAVKRLYENNFKRVEQFMNEV+ILT+L H+NLV LYGCTS+ SREL
Sbjct: 341 GKLQDGRVVAVKRLYENNFKRVEQFMNEVQILTRLQHQNLVKLYGCTSRRSREL 394



 Score = 43.1 bits (100), Expect(2) = 9e-25
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = -1

Query: 367 YPFNQSSYYHNINSFHQKHSIISLLRVSTKTAHFNPSRELGDRGFSTMYYGK 212
           YP+ +S        F  +  + S + +   T +F+PSRELGD GF T+YYGK
Sbjct: 293 YPYTKSDIEKGSTYFGVQ--VFSYMELEEATNNFDPSRELGDGGFGTVYYGK 342


>emb|CBI33628.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 95.5 bits (236), Expect(2) = 9e-25
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = -3

Query: 185 GMLQDGRVVAVKRLYENNFKRVEQFMNEVEILTKLNHKNLVNLYGCTSK*SREL 24
           G LQDGRVVAVKRLYENNFKRVEQFMNEV+ILT+L H+NLV LYGCTS+ SREL
Sbjct: 295 GKLQDGRVVAVKRLYENNFKRVEQFMNEVQILTRLQHQNLVKLYGCTSRRSREL 348



 Score = 43.1 bits (100), Expect(2) = 9e-25
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = -1

Query: 367 YPFNQSSYYHNINSFHQKHSIISLLRVSTKTAHFNPSRELGDRGFSTMYYGK 212
           YP+ +S        F  +  + S + +   T +F+PSRELGD GF T+YYGK
Sbjct: 247 YPYTKSDIEKGSTYFGVQ--VFSYMELEEATNNFDPSRELGDGGFGTVYYGK 296


>ref|XP_002516765.1| wall-associated kinase, putative [Ricinus communis]
           gi|223544138|gb|EEF45663.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 685

 Score = 92.4 bits (228), Expect(2) = 1e-21
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -3

Query: 185 GMLQDGRVVAVKRLYENNFKRVEQFMNEVEILTKLNHKNLVNLYGCTSK*SREL 24
           G+L DGRVVAVKRL+ENN KR EQFMNE+EILT+L HKNLV LYGCTSK SREL
Sbjct: 374 GILSDGRVVAVKRLFENNMKRAEQFMNEIEILTRLRHKNLVTLYGCTSKRSREL 427



 Score = 35.8 bits (81), Expect(2) = 1e-21
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = -1

Query: 277 TAHFNPSRELGDRGFSTMYYG 215
           T +F+PS+ELGD GF T+YYG
Sbjct: 354 TDNFDPSKELGDGGFGTVYYG 374


>ref|XP_002527017.1| wall-associated kinase, putative [Ricinus communis]
           gi|223533652|gb|EEF35389.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 673

 Score = 88.2 bits (217), Expect(2) = 3e-21
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -3

Query: 185 GMLQDGRVVAVKRLYENNFKRVEQFMNEVEILTKLNHKNLVNLYGCTSK*SREL 24
           G L+DGR VAVKRLYE+N++RVEQF+NE+EILT+L HKNLV LYGCTS+ SREL
Sbjct: 350 GKLKDGREVAVKRLYEHNYRRVEQFINEIEILTRLRHKNLVTLYGCTSRRSREL 403



 Score = 38.5 bits (88), Expect(2) = 3e-21
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
 Frame = -1

Query: 442 QFTYVFTAPLTGGIFYLL---VKTVHFGYPFNQSSYYHNINSFHQKH------------- 311
           +FT ++     G I  LL   +   H+    N SS   + NSF                 
Sbjct: 259 KFTLIYAGAGIGLIALLLSFYIFRSHYKRRRNASSNILSTNSFSPSSRSDLEGGSVYFGV 318

Query: 310 SIISLLRVSTKTAHFNPSRELGDRGFSTMYYGK 212
           S+ S   +   T++F+  +ELGD GF T+YYGK
Sbjct: 319 SVFSYAELEKATSNFDSKKELGDGGFGTVYYGK 351


>emb|CAN62706.1| hypothetical protein VITISV_041559 [Vitis vinifera]
          Length = 534

 Score = 92.8 bits (229), Expect(2) = 3e-21
 Identities = 43/58 (74%), Positives = 52/58 (89%)
 Frame = -3

Query: 197 LLSVGMLQDGRVVAVKRLYENNFKRVEQFMNEVEILTKLNHKNLVNLYGCTSK*SREL 24
           L  +G L+DGR VAVKRLYENN++RVEQFMNEV+ILT+L H+NLV+LYGCTS+ SREL
Sbjct: 208 LCQIGQLRDGREVAVKRLYENNYRRVEQFMNEVQILTRLRHRNLVSLYGCTSRHSREL 265



 Score = 33.9 bits (76), Expect(2) = 3e-21
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 310 SIISLLRVSTKTAHFNPSRELGDRGFSTMYYGK 212
           +I     +   T +F+P RE+GD GF ++Y+GK
Sbjct: 170 AIFPYTELEEATNYFDPDREIGDGGFGSVYHGK 202


Top