BLASTX nr result

ID: Bupleurum21_contig00033492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033492
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera]   159   6e-40
emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]   157   1e-39
emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]   157   2e-39
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]   157   5e-39
gb|ABM55238.1| integrase [Beta vulgaris]                              155   1e-38

>emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera]
          Length = 691

 Score =  159 bits (401), Expect(2) = 6e-40
 Identities = 82/129 (63%), Positives = 92/129 (71%)
 Frame = -3

Query: 387 NGVLEEEVYVRQPPGFEDHLNPSYVYKLYKALYGLKQAPRAWYERLSKFLIDKGFKMGTA 208
           NG + EEVYV QPPGF+    P++V+KL K LYGLKQAPRAWYERLSKFL+ KGFKMG  
Sbjct: 353 NGFINEEVYVEQPPGFQSFNFPNHVFKLKKXLYGLKQAPRAWYERLSKFLLKKGFKMGKI 412

Query: 207 DTTLFTKTEDDDILLVQIYVDDIIFGATXXXXXXXXXXXXXXXXXXXXMGELNFFLGLQI 28
           DTTLF KT++ D+LLVQIYVDDIIFGAT                    MGELNFFLGLQI
Sbjct: 413 DTTLFIKTKEKDMLLVQIYVDDIIFGATNDSLCEDFSKCMHSEFEMSMMGELNFFLGLQI 472

Query: 27  KQLDDGIHI 1
           KQL +G  I
Sbjct: 473 KQLKEGTFI 481



 Score = 30.4 bits (67), Expect(2) = 6e-40
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 437 FACHKGFKVYQMDVKSAMV 381
           FAC K F +YQMDVKSA +
Sbjct: 334 FACFKDFILYQMDVKSAFL 352


>emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]
          Length = 550

 Score =  157 bits (397), Expect(2) = 1e-39
 Identities = 80/129 (62%), Positives = 93/129 (72%)
 Frame = -3

Query: 387 NGVLEEEVYVRQPPGFEDHLNPSYVYKLYKALYGLKQAPRAWYERLSKFLIDKGFKMGTA 208
           NG + EEVYV QPPGF+    P++V+KL K LYGLKQ+PRAWYERLSKFL+ KGFKMG  
Sbjct: 288 NGFINEEVYVEQPPGFQSFNFPNHVFKLKKTLYGLKQSPRAWYERLSKFLLKKGFKMGKI 347

Query: 207 DTTLFTKTEDDDILLVQIYVDDIIFGATXXXXXXXXXXXXXXXXXXXXMGELNFFLGLQI 28
           DTTLF KT+++D+LLVQIYVDDIIFGAT                    MGELNFFLGL+I
Sbjct: 348 DTTLFIKTKENDMLLVQIYVDDIIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFLGLKI 407

Query: 27  KQLDDGIHI 1
           KQL +G  I
Sbjct: 408 KQLKEGTFI 416



 Score = 30.8 bits (68), Expect(2) = 1e-39
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 437 FACHKGFKVYQMDVKSAMV 381
           FAC K F +YQMDVKSA +
Sbjct: 269 FACFKDFVLYQMDVKSAFL 287


>emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]
          Length = 857

 Score =  157 bits (398), Expect(2) = 2e-39
 Identities = 82/129 (63%), Positives = 92/129 (71%)
 Frame = -3

Query: 387 NGVLEEEVYVRQPPGFEDHLNPSYVYKLYKALYGLKQAPRAWYERLSKFLIDKGFKMGTA 208
           NG + EEVYV QPPGF+    P+ V++L KALYGLKQAPRAWYERLSKFL+ KGFKMG  
Sbjct: 65  NGFINEEVYVEQPPGFQSFNFPNNVFRLKKALYGLKQAPRAWYERLSKFLLKKGFKMGKI 124

Query: 207 DTTLFTKTEDDDILLVQIYVDDIIFGATXXXXXXXXXXXXXXXXXXXXMGELNFFLGLQI 28
           DTTLF KT+D+ +LLVQIYVDDIIFGAT                    MGELNFFLGLQI
Sbjct: 125 DTTLFIKTKDNGMLLVQIYVDDIIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFLGLQI 184

Query: 27  KQLDDGIHI 1
           KQL +G  I
Sbjct: 185 KQLKEGTFI 193



 Score = 30.0 bits (66), Expect(2) = 2e-39
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 437 FACHKGFKVYQMDVKSAMV 381
           FAC K F +YQMDVKSA +
Sbjct: 46  FACFKYFVLYQMDVKSAFL 64


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score =  157 bits (398), Expect(2) = 5e-39
 Identities = 82/129 (63%), Positives = 91/129 (70%)
 Frame = -3

Query: 387  NGVLEEEVYVRQPPGFEDHLNPSYVYKLYKALYGLKQAPRAWYERLSKFLIDKGFKMGTA 208
            NG + EEVY  QPPGF+    P++V+KL KALYGLKQAPRAWYERLSKFL  KGFKMG  
Sbjct: 739  NGFINEEVYXEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKI 798

Query: 207  DTTLFTKTEDDDILLVQIYVDDIIFGATXXXXXXXXXXXXXXXXXXXXMGELNFFLGLQI 28
            DTTLF KT++ D+LLVQIYVDDIIFGAT                    MGELNFFLGLQI
Sbjct: 799  DTTLFIKTKEKDMLLVQIYVDDIIFGATNBSLCEDFSKCMHSEFEMSMMGELNFFLGLQI 858

Query: 27   KQLDDGIHI 1
            KQL +G  I
Sbjct: 859  KQLKEGTFI 867



 Score = 28.5 bits (62), Expect(2) = 5e-39
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 437 FACHKGFKVYQMDVKS 390
           FAC K F +YQMDVKS
Sbjct: 720 FACFKDFILYQMDVKS 735


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  155 bits (391), Expect(2) = 1e-38
 Identities = 80/131 (61%), Positives = 91/131 (69%)
 Frame = -3

Query: 399  CEVCNGVLEEEVYVRQPPGFEDHLNPSYVYKLYKALYGLKQAPRAWYERLSKFLIDKGFK 220
            C   NG L E+VYV QPPGFE++  P++VYKL KALYGLKQAPR+WYERLSKFL++  FK
Sbjct: 1121 CAFLNGYLNEDVYVEQPPGFENNNLPNHVYKLDKALYGLKQAPRSWYERLSKFLLENNFK 1180

Query: 219  MGTADTTLFTKTEDDDILLVQIYVDDIIFGATXXXXXXXXXXXXXXXXXXXXMGELNFFL 40
             G  D TLF K++  DILLVQIYVDDIIFGAT                    MGELNFFL
Sbjct: 1181 RGKVDKTLFLKSKGTDILLVQIYVDDIIFGATNETLCKEFSRLVSNEFEMSMMGELNFFL 1240

Query: 39   GLQIKQLDDGI 7
            GLQIKQ + GI
Sbjct: 1241 GLQIKQTEKGI 1251



 Score = 29.6 bits (65), Expect(2) = 1e-38
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 437  FACHKGFKVYQMDVKSAMV 381
            FA + GFK+YQMDVK A +
Sbjct: 1106 FAAYMGFKLYQMDVKCAFL 1124


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