BLASTX nr result

ID: Bupleurum21_contig00033469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033469
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago ...    88   6e-16
ref|XP_003612660.1| hypothetical protein MTR_5g027490 [Medicago ...    86   2e-15
emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]    86   3e-15
dbj|BAK06126.1| predicted protein [Hordeum vulgare subsp. vulgare]     85   5e-15

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/118 (35%), Positives = 71/118 (60%)
 Frame = +1

Query: 1   PLDCISWHHYPKKQKDELWNFVKTKYMIPEEGKTFTLRTINALWRTYKSRIKKDHYLEYN 180
           PL  + W   P ++K+ +W FV+TK+ I    KT+ LR++ + WR +K+++K +HY  + 
Sbjct: 43  PLTFVDWFAMPDEKKENMWQFVQTKFDIEPVCKTWVLRSLASKWRNWKAKLKSEHYYPHK 102

Query: 181 NDEDRLRNKPSEISAEEFKVLLKYWGNDEIKRRSKAASENRQKFVETHTTGRTSFAQI 354
            DE+RL ++   +  E++ +L+ YW ++E + RS     NR     THT G  SFA+I
Sbjct: 103 TDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQKSTHTAGSKSFARI 160


>ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago truncatula]
           gi|355515367|gb|AES96990.1| hypothetical protein
           MTR_5g043940 [Medicago truncatula]
          Length = 714

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = +1

Query: 1   PLDCISWHHYPKKQKDEL----WNFVKTKYMIPEEGKTFTLRTINALWRTYKSRIKKDHY 168
           PL   +W    K  KDE+    W +V  KY+IPE+GK      ++  WR YK  IKK+H+
Sbjct: 401 PLTFNNWKALVKTWKDEVIDPVWEYVNEKYIIPEKGKKDVFAIVSDAWRRYKYLIKKNHF 460

Query: 169 LEYNNDEDRLRNKPSEISAEEFKVLLKYWGNDEIKRRSKAASENRQKFVETHTTGRTSFA 348
            +Y    +RL+N+P E+  E+FK LL YW +   +  S   ++N  +    H TG  +FA
Sbjct: 461 TKYKTMHERLKNRPEEVPEEDFKKLLVYWRDRNSQEVSLQNAQNIAQLKWRHRTGNKAFA 520

Query: 349 QI 354
            I
Sbjct: 521 VI 522


>ref|XP_003612660.1| hypothetical protein MTR_5g027490 [Medicago truncatula]
           gi|355513995|gb|AES95618.1| hypothetical protein
           MTR_5g027490 [Medicago truncatula]
          Length = 244

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/115 (37%), Positives = 63/115 (54%)
 Frame = +1

Query: 1   PLDCISWHHYPKKQKDELWNFVKTKYMIPEEGKTFTLRTINALWRTYKSRIKKDHYLEYN 180
           PL   +W   PKK+K  +W +V  +Y++PE+G+      IN  WR YK  IKK+H+ +Y 
Sbjct: 111 PLTYTNWKAIPKKKKT-IWAYVNKRYIVPEKGQKDVYAIINDAWRRYKWLIKKNHFTKYR 169

Query: 181 NDEDRLRNKPSEISAEEFKVLLKYWGNDEIKRRSKAASENRQKFVETHTTGRTSF 345
           N  +RL+N+P  I    FK L+ YW  + I+  S   ++N  K    H  G  SF
Sbjct: 170 NLRERLKNRPDGILEAHFKKLMTYWRYEAIREISHQNAKNIDKQKWRHRAGSISF 224


>emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]
          Length = 1163

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/118 (33%), Positives = 68/118 (57%)
 Frame = +1

Query: 1    PLDCISWHHYPKKQKDELWNFVKTKYMIPEEGKTFTLRTINALWRTYKSRIKKDHYLEYN 180
            P+    W+H  +  K+++W  V  KY + E  K++ L+    L+R+Y++++K  +Y  YN
Sbjct: 872  PIQVQDWNHVSEDVKEKIWALVLEKYELEETCKSYILQCCGNLFRSYRNKMKAKYYNPYN 931

Query: 181  NDEDRLRNKPSEISAEEFKVLLKYWGNDEIKRRSKAASENRQKFVETHTTGRTSFAQI 354
             DE+RL  +P  +S ++++ L+ +WG  E K  S     NR K V  HT+   S+AQI
Sbjct: 932  TDEERLCQRPPHLSDDDWRWLIHFWGTPEAKDISDKNKANRAKQVIKHTSRSKSYAQI 989


>dbj|BAK06126.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1084

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/118 (33%), Positives = 65/118 (55%)
 Frame = +1

Query: 1    PLDCISWHHYPKKQKDELWNFVKTKYMIPEEGKTFTLRTINALWRTYKSRIKKDHYLEYN 180
            PL  +SW + PK+ KD +W+ VK K+ +    +   LR+I   WR +K  +K+ HY  + 
Sbjct: 782  PLTYVSWTYIPKENKDVMWHIVKLKFDVDPSHELSLLRSIRNKWRIWKCHLKRKHYDPHI 841

Query: 181  NDEDRLRNKPSEISAEEFKVLLKYWGNDEIKRRSKAASENRQKFVETHTTGRTSFAQI 354
             +E+RL ++   +  E+++VL+ YW  ++ K RS      R K      TG  SFA+I
Sbjct: 842  TEEERLADRVPRVLKEQWQVLVAYWNTEKAKARSTVGKACRAKSTFISKTGSKSFARI 899


Top