BLASTX nr result

ID: Bupleurum21_contig00033405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033405
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16268.3| unnamed protein product [Vitis vinifera]              185   6e-45
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   185   6e-45
emb|CAN60319.1| hypothetical protein VITISV_002853 [Vitis vinifera]   185   6e-45
gb|AAT40555.2| Translation elongation factor, putative [Solanum ...   184   1e-44
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        179   2e-43

>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  185 bits (469), Expect = 6e-45
 Identities = 93/162 (57%), Positives = 115/162 (70%)
 Frame = +2

Query: 2    EYPRLSTEKKKLGCIIFAAVDLSVTDIQXXXXXXXXXXXXVDAFLKDKNMDVILKQAHLT 181
            +YP   TEK+K G I+FAAV L VT+IQ            V+AF KDK+++  L+ AH+T
Sbjct: 867  DYPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEAFFKDKHLENSLRNAHVT 926

Query: 182  LAHKKSQGVTAVASYGSVVHKNVPVKMTALFFSDKFAALEAHLGSVDGEEVKSMIKWPHI 361
            LAHK+S GVTAVA+YG  +++ VPV  TAL FSDK AALEA+ GSVDGE + S  +WPH+
Sbjct: 927  LAHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYPGSVDGERITSKNQWPHV 986

Query: 362  TLWTANGVTCKEAVTLPQLYSEGKATRIKIKPPVTIVGTVEF 487
            TLWT  GV  KEA  LP+L SEG ATRI I PP+TI GT+EF
Sbjct: 987  TLWTGAGVAPKEANMLPELISEGTATRIDISPPITISGTLEF 1028


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  185 bits (469), Expect = 6e-45
 Identities = 93/162 (57%), Positives = 115/162 (70%)
 Frame = +2

Query: 2    EYPRLSTEKKKLGCIIFAAVDLSVTDIQXXXXXXXXXXXXVDAFLKDKNMDVILKQAHLT 181
            +YP   TEK+K G I+FAAV L VT+IQ            V+AF KDK+++  L+ AH+T
Sbjct: 1003 DYPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEAFFKDKHLENSLRNAHVT 1062

Query: 182  LAHKKSQGVTAVASYGSVVHKNVPVKMTALFFSDKFAALEAHLGSVDGEEVKSMIKWPHI 361
            LAHK+S GVTAVA+YG  +++ VPV  TAL FSDK AALEA+ GSVDGE + S  +WPH+
Sbjct: 1063 LAHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYPGSVDGERITSKNQWPHV 1122

Query: 362  TLWTANGVTCKEAVTLPQLYSEGKATRIKIKPPVTIVGTVEF 487
            TLWT  GV  KEA  LP+L SEG ATRI I PP+TI GT+EF
Sbjct: 1123 TLWTGAGVAPKEANMLPELISEGTATRIDISPPITISGTLEF 1164


>emb|CAN60319.1| hypothetical protein VITISV_002853 [Vitis vinifera]
          Length = 302

 Score =  185 bits (469), Expect = 6e-45
 Identities = 93/162 (57%), Positives = 115/162 (70%)
 Frame = +2

Query: 2   EYPRLSTEKKKLGCIIFAAVDLSVTDIQXXXXXXXXXXXXVDAFLKDKNMDVILKQAHLT 181
           +YP   TEK+K G I+FAAV L VT+IQ            V+AF KDK+++  L+ AH+T
Sbjct: 140 DYPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEAFFKDKHLENSLRNAHVT 199

Query: 182 LAHKKSQGVTAVASYGSVVHKNVPVKMTALFFSDKFAALEAHLGSVDGEEVKSMIKWPHI 361
           LAHK+S GVTAVA+YG  +++ VPV  TAL FSDK AALEA+ GSVDGE + S  +WPH+
Sbjct: 200 LAHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYPGSVDGERITSKNQWPHV 259

Query: 362 TLWTANGVTCKEAVTLPQLYSEGKATRIKIKPPVTIVGTVEF 487
           TLWT  GV  KEA  LP+L SEG ATRI I PP+TI GT+EF
Sbjct: 260 TLWTGAGVAPKEANMLPELISEGTATRIDISPPITISGTLEF 301


>gb|AAT40555.2| Translation elongation factor, putative [Solanum demissum]
          Length = 223

 Score =  184 bits (466), Expect = 1e-44
 Identities = 92/162 (56%), Positives = 115/162 (70%)
 Frame = +2

Query: 2   EYPRLSTEKKKLGCIIFAAVDLSVTDIQXXXXXXXXXXXXVDAFLKDKNMDVILKQAHLT 181
           EY   S+EK+KLG I+FAA+ L V +I             V  FLKDK+M+  +++AHLT
Sbjct: 61  EYAAPSSEKRKLGSIVFAAISLPVPEILGLLNDLAKKDPKVGDFLKDKSMESCIQKAHLT 120

Query: 182 LAHKKSQGVTAVASYGSVVHKNVPVKMTALFFSDKFAALEAHLGSVDGEEVKSMIKWPHI 361
           LAHK+S GVTAVA+YGS +H+ VPV + AL FSDK AALEA  GSV+GE+V S   WPH+
Sbjct: 121 LAHKRSHGVTAVANYGSFLHQKVPVDIAALLFSDKLAALEAEPGSVEGEKVNSKNPWPHV 180

Query: 362 TLWTANGVTCKEAVTLPQLYSEGKATRIKIKPPVTIVGTVEF 487
           T+WT  G T K+A TLP L S+GKATR+ I PPVTI GT+EF
Sbjct: 181 TIWTGAGATAKDANTLPHLLSQGKATRVDINPPVTITGTLEF 222


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/155 (58%), Positives = 112/155 (72%)
 Frame = +2

Query: 23   EKKKLGCIIFAAVDLSVTDIQXXXXXXXXXXXXVDAFLKDKNMDVILKQAHLTLAHKKSQ 202
            EK+KLG I+FAA+ L V +I             V  F+KDK+M+  +++AHLTLAHK+S 
Sbjct: 1012 EKRKLGSIVFAAISLPVPEILGLLNDLAKKDPKVGDFIKDKSMESSIQKAHLTLAHKRSH 1071

Query: 203  GVTAVASYGSVVHKNVPVKMTALFFSDKFAALEAHLGSVDGEEVKSMIKWPHITLWTANG 382
            GVTAVA+YGS +H+ VPV + AL FSDK AALEA  GSV+GE++ S   WPHITLW+  G
Sbjct: 1072 GVTAVANYGSFLHQKVPVDVAALLFSDKLAALEAEPGSVEGEKINSKNSWPHITLWSGAG 1131

Query: 383  VTCKEAVTLPQLYSEGKATRIKIKPPVTIVGTVEF 487
            V  K+A TLPQL S+GKATRI I PPVTI GT+EF
Sbjct: 1132 VAAKDANTLPQLLSQGKATRIDINPPVTITGTLEF 1166


Top