BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033383
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]           107   1e-21
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...   105   4e-21
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   103   1e-20
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   102   2e-20
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   100   2e-19

>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/94 (50%), Positives = 66/94 (70%)
 Frame = -3

Query: 430 NNHSDNRNDQDNPLYLQNSDSPGMKLVADTFDGTGYSSWKRSMKIALSARNKLGFIDGTI 251
           N  +++ +   +P YL NSD+PG  + ++ FDGT Y  WK S+KIAL A+NKL FIDG++
Sbjct: 4   NPVTESHDSIHSPYYLTNSDNPGASITSEVFDGTNYDDWKISIKIALDAKNKLVFIDGSV 63

Query: 250 LKPSPESPTFKAWSRCNDMVISWILSSLSKPITK 149
            +P    P F+ WSRCN +V SW+L+S+SKPI K
Sbjct: 64  PRPPESDPMFRIWSRCNSLVKSWLLNSVSKPIYK 97


>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17065314|gb|AAL32811.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21387147|gb|AAM47977.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 411

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/82 (54%), Positives = 63/82 (76%)
 Frame = -3

Query: 400 DNPLYLQNSDSPGMKLVADTFDGTGYSSWKRSMKIALSARNKLGFIDGTILKPSPESPTF 221
           DNPL L +SD PG+ +VA   DG+ Y+SW  +M+I+L A+NKLGF+DG++L+PS +  TF
Sbjct: 64  DNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTF 123

Query: 220 KAWSRCNDMVISWILSSLSKPI 155
           + WSRCN MV SWIL+ ++K I
Sbjct: 124 RIWSRCNSMVKSWILNVVNKEI 145


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  103 bits (257), Expect = 1e-20
 Identities = 44/97 (45%), Positives = 67/97 (69%)
 Frame = -3

Query: 445 LVMAPNNHSDNRNDQDNPLYLQNSDSPGMKLVADTFDGTGYSSWKRSMKIALSARNKLGF 266
           +V+ P +   N++    PL++ N+D PG++L++   DG+ Y  W  +MKIAL A+NK+GF
Sbjct: 1   MVIPPESMDPNQS----PLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGF 56

Query: 265 IDGTILKPSPESPTFKAWSRCNDMVISWILSSLSKPI 155
           +DGT+ +P    PTF+ WSRCN MV SW+L+S+S  I
Sbjct: 57  VDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQI 93


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/86 (52%), Positives = 63/86 (73%)
 Frame = -3

Query: 406 DQDNPLYLQNSDSPGMKLVADTFDGTGYSSWKRSMKIALSARNKLGFIDGTILKPSPESP 227
           D ++P YL +SD+PGM L+  +FDG+ Y +WKR + I+LSA+NKLGFI G   KP  E  
Sbjct: 32  DINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDL 91

Query: 226 TFKAWSRCNDMVISWILSSLSKPITK 149
            F+ W RC+DMV++W+L+SLSK I +
Sbjct: 92  LFEQWRRCSDMVLAWLLNSLSKEIAE 117


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/97 (47%), Positives = 64/97 (65%)
 Frame = -3

Query: 439 MAPNNHSDNRNDQDNPLYLQNSDSPGMKLVADTFDGTGYSSWKRSMKIALSARNKLGFID 260
           M P    D  +   +P  L N DSPG  LV++  DGT +SSWK +M ++L A+NK+ F+D
Sbjct: 48  MYPFPQFDFSDAHYSPFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVD 107

Query: 259 GTILKPSPESPTFKAWSRCNDMVISWILSSLSKPITK 149
           GT+ +P    P+F+ WSRCN MV SWIL+S++K I K
Sbjct: 108 GTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYK 144