BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033381
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   172   1e-40
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   145   2e-32
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   130   4e-28
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   126   8e-27
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   126   8e-27

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  172 bits (436), Expect = 1e-40
 Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 3/291 (1%)
 Frame = -3

Query: 866  VDNSSTWKLLWCIKAPPKALNVVWRALSGCLPTLSQLQIKHVPVQNWCPNCNGDVETIMH 687
            VD++  W  LW + APPK LN  WRA   CLPT   L I+HV     CP C  ++ET +H
Sbjct: 502  VDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLH 561

Query: 686  CLVMCPFAHQCWLTLNPTITTFNYTDFMS*LTGKLTTGDSNQSAEVIVLCWAIWRARNDL 507
             LV C  A   W      +   N+  F+  L       D    A+ + +CW +W  RND+
Sbjct: 562  ALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDV 621

Query: 506  VWNQKFSTPNKVVAAAKQFLTQWKLSQNRSSVALIQPQVEGDGASSWVRPQTNSVKVSAD 327
            VWN +     +VV      L  W  +    + A+  P      +S W +P    +K++ D
Sbjct: 622  VWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSY----SSKWQKPDYGWIKINVD 677

Query: 326  AAIFADQESVGFGLIARDSEGGLIE--AKALIHHELISPMLAEAMAIKEALSWIDKTNWH 153
             A+F D+ ++  G + RD +G  +   AK   H  L  P + EA+ ++E LSWI + +  
Sbjct: 678  GAVFPDKGAI--GAVFRDHQGRFMGGFAKPFPHQTL--PKVVEALGVREVLSWIHERSRS 733

Query: 152  GVTLESDCLTVIQAIRSKAPMRVRFGGVIKECREFIR-LNNVKLLFVKRSA 3
             + +E+DCL V+QAI+ K+     FG +I +C + ++ L +V++++ +RSA
Sbjct: 734  RIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSA 784


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score =  145 bits (365), Expect = 2e-32
 Identities = 88/287 (30%), Positives = 137/287 (47%), Gaps = 1/287 (0%)
 Frame = -3

Query: 860  NSSTWKLLWCIKAPPKALNVVWRALSGCLPTLSQLQIKHVPVQNWCPNCNGDVETIMHCL 681
            N   W+ LW +    K    +WRAL+  LP  + L ++ V   + CP C    ETIMH L
Sbjct: 180  NVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHIL 239

Query: 680  VMCPFAHQCWLTLNPTITTFNYTDFMS*LTGKLTTGDSNQSAEVIVLCWAIWRARNDLVW 501
            V+C    Q W  +N        ++ +          D +  A  +VL W++W   ND+VW
Sbjct: 240  VLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVW 299

Query: 500  NQKFSTPNKVVAAAKQFLTQWKLSQNRSSVALIQPQVEGDGASSWVRPQTNSVKVSADAA 321
            N K  +   V + A  FL QW  ++  +    +     G G   W +P T   K++ DA+
Sbjct: 300  NGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAG-GDCLWQKPATGKYKLNVDAS 358

Query: 320  IFADQESVGFGLIARDSEGGLIEAKALIHHELISPMLAEAMAIKEALSWIDKTNWHGVTL 141
              A++   G   + RD+ G  I    +I   + +P +AEA A+KEALSWI       V +
Sbjct: 359  SSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKEALSWIHAKGMEEVQI 418

Query: 140  ESDCLTVIQAIRSKAPMRVRFGGVIKECREFIR-LNNVKLLFVKRSA 3
            E+DCL  I+ +  +         ++K+C++ +R LN   L+FV  SA
Sbjct: 419  ETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSA 465


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  130 bits (327), Expect = 4e-28
 Identities = 85/290 (29%), Positives = 125/290 (43%), Gaps = 6/290 (2%)
 Frame = -3

Query: 854  STWKLLWCIKAPPKALNVVWRALSGCLPTLSQLQIKHVPVQNWCPNCNGDVETIMHCLVM 675
            S W  +W +K PPK  N +WRA   CLPT  +LQ K V   + C  C+   E   H   M
Sbjct: 364  SNWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFM 423

Query: 674  CPFAHQCWLTL---NPTITTFNY-TDFMS*LTGKLTTGDSNQSAEVIVLCWAIWRARNDL 507
            C  +   W  +   +P +  F+    F + +   L   D  Q     V  W+IW+ RN+ 
Sbjct: 424  CSKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNK 483

Query: 506  VWNQKFSTPNKVVAAAKQFLTQWKLSQNRSSVALIQPQVEGDGASSWVRPQTNSVKVSAD 327
            VWN    T   + A A   LT W+ +QN    +   P    D    WV+P       + D
Sbjct: 484  VWNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPND--LKWVKPSPGRFTCNVD 541

Query: 326  AAIFADQESVGFGLIARDSEGGLIEAKALIHHELISPMLAEAMAIKEALSWIDKTNWHGV 147
            A+    +  VG G+  RD EG  + AK      L+   L EA+ +  A+ W+       V
Sbjct: 542  ASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIV 601

Query: 146  TLESDCLTVIQAIRSKAPMRVRFGGVIKECREFIRLNNV--KLLFVKRSA 3
              E D  +V+ ++         F  VI ECR  +  + V   + F++R A
Sbjct: 602  DFELDSKSVVDSLYGSTSGVSNFSAVINECRRLLASDLVTSDVRFIRRQA 651


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  126 bits (316), Expect = 8e-27
 Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 4/277 (1%)
 Frame = -3

Query: 869  IVDNSSTWKLLWCIKAPPKALNVVWRALSGCLPTLSQLQIKHVPVQNWCPNCNGDVETIM 690
            ++++   WK LW I AP K    +WRA   CL T  QL+ +H+P  + C  CN D +T+ 
Sbjct: 1056 LLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRD-DTVE 1114

Query: 689  HCLVMCPFAHQCWLTLNPTITTF----NYTDFMS*LTGKLTTGDSNQSAEVIVLCWAIWR 522
            H  + CPFA Q W  +            ++     +   L  G S+ +  + V  W IW 
Sbjct: 1115 HVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWE 1174

Query: 521  ARNDLVWNQKFSTPNKVVAAAKQFLTQWKLSQNRSSVALIQPQVEGDGASSWVRPQTNSV 342
            ARN+   N     P +VV     ++    + ++ +     Q          W  P  +  
Sbjct: 1175 ARNNTKNNNGTVHPQRVVIKILSYVDM--ILKHNTKTVDGQRGGNTQAIPRWQPPPASVW 1232

Query: 341  KVSADAAIFADQESVGFGLIARDSEGGLIEAKALIHHELISPMLAEAMAIKEALSWIDKT 162
             +++DAAIF+   ++G G + RD+ G  + A + +  +++ P LAEA+AI+ AL    + 
Sbjct: 1233 MINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEE 1292

Query: 161  NWHGVTLESDCLTVIQAIRSKAPMRVRFGGVIKECRE 51
                + + SDCLTVI+ I++    R   G VI++ ++
Sbjct: 1293 GLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKK 1329


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  126 bits (316), Expect = 8e-27
 Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 4/277 (1%)
 Frame = -3

Query: 869  IVDNSSTWKLLWCIKAPPKALNVVWRALSGCLPTLSQLQIKHVPVQNWCPNCNGDVETIM 690
            ++++   WK LW I AP K    +WRA   CL T  QL+ +H+P  + C  CN D +T+ 
Sbjct: 1013 LLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRD-DTVE 1071

Query: 689  HCLVMCPFAHQCWLTLNPTITTF----NYTDFMS*LTGKLTTGDSNQSAEVIVLCWAIWR 522
            H  + CPFA Q W  +            ++     +   L  G S+ +  + V  W IW 
Sbjct: 1072 HVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWE 1131

Query: 521  ARNDLVWNQKFSTPNKVVAAAKQFLTQWKLSQNRSSVALIQPQVEGDGASSWVRPQTNSV 342
            ARN+   N     P +VV     ++    + ++ +     Q          W  P  +  
Sbjct: 1132 ARNNTKNNNGTVHPQRVVIKILSYVDM--ILKHNTKTVDGQRGGNTQAIPRWQPPPASVW 1189

Query: 341  KVSADAAIFADQESVGFGLIARDSEGGLIEAKALIHHELISPMLAEAMAIKEALSWIDKT 162
             +++DAAIF+   ++G G + RD+ G  + A + +  +++ P LAEA+AI+ AL    + 
Sbjct: 1190 MINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEE 1249

Query: 161  NWHGVTLESDCLTVIQAIRSKAPMRVRFGGVIKECRE 51
                + + SDCLTVI+ I++    R   G VI++ ++
Sbjct: 1250 GLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKK 1286