BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033332
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   149   3e-34
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
emb|CBI27634.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33

>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/128 (59%), Positives = 97/128 (75%)
 Frame = -2

Query: 384 FSDILQLVSSADQGTDVNRGTEDGDQHDNGTLTVDVDPWSSSPYVDMLAEQVASSKHSSP 205
           F DI+  ++ A   T++N G E+           ++D WSSSP++D LA QV+S+ +SS 
Sbjct: 491 FIDIINFMTCAQDTTNINDGEENSCN--------EIDEWSSSPHMDKLANQVSSTGYSSQ 542

Query: 204 LFLLSRAKRVEEKGADSFDIDMVNTFLSIFLAKGKLSFACKLFEIFSDMGINPVSYTYNS 25
           +F  SR +RV+EKG DSFD+DMVNTFLSIFLAKGKLS ACKLFEIFSD G++PVSYTYNS
Sbjct: 543 MFTPSRGQRVQEKGPDSFDVDMVNTFLSIFLAKGKLSLACKLFEIFSDAGVDPVSYTYNS 602

Query: 24  LLSSFVKK 1
           ++SSFVKK
Sbjct: 603 IMSSFVKK 610


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/127 (59%), Positives = 93/127 (73%)
 Frame = -2

Query: 381 SDILQLVSSADQGTDVNRGTEDGDQHDNGTLTVDVDPWSSSPYVDMLAEQVASSKHSSPL 202
           S+I+ ++   D     N G +D        ++ + D WSSSPY+D LA QV S+ + S  
Sbjct: 542 SEIINIIRYPDLK---NHGLDDNAVEHGDNISAETDQWSSSPYMDHLANQVKSTDNCSQS 598

Query: 201 FLLSRAKRVEEKGADSFDIDMVNTFLSIFLAKGKLSFACKLFEIFSDMGINPVSYTYNSL 22
           F L+R +RV+ KG +SFDIDMVNTFLSIFLAKGKLS ACKLFEIFSDMG+NPVSYTYNS+
Sbjct: 599 FSLARGQRVQAKGVESFDIDMVNTFLSIFLAKGKLSVACKLFEIFSDMGVNPVSYTYNSI 658

Query: 21  LSSFVKK 1
           +SSFVKK
Sbjct: 659 MSSFVKK 665


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/108 (67%), Positives = 87/108 (80%)
 Frame = -2

Query: 324 TEDGDQHDNGTLTVDVDPWSSSPYVDMLAEQVASSKHSSPLFLLSRAKRVEEKGADSFDI 145
           ++DG   D  + + D D WSSSPY+D LA Q  S+  SS LF L+R +RV+ KGA SFDI
Sbjct: 375 SDDGATEDEKSSSADTDQWSSSPYMDHLANQAKSTDLSSQLFSLARGQRVQAKGAGSFDI 434

Query: 144 DMVNTFLSIFLAKGKLSFACKLFEIFSDMGINPVSYTYNSLLSSFVKK 1
           DMVNTFLSIFLAKGKLS ACKLFEIF+DMG++PVSYTYNS++SSFVKK
Sbjct: 435 DMVNTFLSIFLAKGKLSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKK 482


>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  145 bits (367), Expect = 3e-33
 Identities = 78/128 (60%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = -2

Query: 381 SDILQLVSSADQGTDVNRGTE-DGDQHDNGTLTVDVDPWSSSPYVDMLAEQVASSKHSSP 205
           S+I+ L+SSAD   D + G+E D  QH+        D WSSSPY+D LA Q+ S   SS 
Sbjct: 77  SEIMSLISSADTEMDGSPGSEEDVAQHE--------DQWSSSPYMDQLASQLKSIDVSSQ 128

Query: 204 LFLLSRAKRVEEKGADSFDIDMVNTFLSIFLAKGKLSFACKLFEIFSDMGINPVSYTYNS 25
           L  LSR +RV+ KG DSFDIDMVNT+LSIFLAKGKLS ACKLFEIFS+MG++PV YTYNS
Sbjct: 129 LLSLSRGQRVQAKGIDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNS 188

Query: 24  LLSSFVKK 1
           ++++FVKK
Sbjct: 189 MMTAFVKK 196


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  145 bits (367), Expect = 3e-33
 Identities = 78/128 (60%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = -2

Query: 381 SDILQLVSSADQGTDVNRGTE-DGDQHDNGTLTVDVDPWSSSPYVDMLAEQVASSKHSSP 205
           S+I+ L+SSAD   D + G+E D  QH+        D WSSSPY+D LA Q+ S   SS 
Sbjct: 514 SEIMSLISSADTEMDGSPGSEEDVAQHE--------DQWSSSPYMDQLASQLKSIDVSSQ 565

Query: 204 LFLLSRAKRVEEKGADSFDIDMVNTFLSIFLAKGKLSFACKLFEIFSDMGINPVSYTYNS 25
           L  LSR +RV+ KG DSFDIDMVNT+LSIFLAKGKLS ACKLFEIFS+MG++PV YTYNS
Sbjct: 566 LLSLSRGQRVQAKGIDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNS 625

Query: 24  LLSSFVKK 1
           ++++FVKK
Sbjct: 626 MMTAFVKK 633