BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033283
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291822.1| rps3 gene product (mitochondrion) [Daucus ca...    64   3e-08
ref|YP_740426.1| ribosomal protein S3 [Zea luxurians] gi|1102876...    63   4e-08
ref|YP_006460179.1| ribosomal protein subunit S3 (mitochondrion)...    62   6e-08
gb|ACD46917.1| ribosomal protein S3 [Ginkgo biloba]                    62   6e-08
gb|ACZ95683.1| ribosomal protein S3 [Ginkgo biloba]                    62   6e-08

>ref|YP_006291822.1| rps3 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082020|gb|AEY81212.1| ribosomal protein S3
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 564

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/38 (81%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = -1

Query: 568 KMFFGFRLGRCLILHFPKRTFIHLFLPR--RLLKRRGK 461
           ++ FGFRLGRCLILHFPKRTFIHLFLPR  R LKRR K
Sbjct: 50  RLTFGFRLGRCLILHFPKRTFIHLFLPRRPRRLKRREK 87


>ref|YP_740426.1| ribosomal protein S3 [Zea luxurians] gi|110287615|gb|ABG65661.1|
           ribosomal protein S3 (mitochondrion) [Zea luxurians]
          Length = 556

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 568 KMFFGFRLGRCLILHFPKRTFIHLFLPRRLLKRRGK 461
           ++ FGFRLGRC+ILHFPKRTFIH FLPRR LKRR K
Sbjct: 50  RLTFGFRLGRCIILHFPKRTFIHFFLPRR-LKRRDK 84


>ref|YP_006460179.1| ribosomal protein subunit S3 (mitochondrion) [Mimulus guttatus]
           gi|391348946|ref|YP_006460186.1| ribosomal protein
           subunit S3 (mitochondrion) [Mimulus guttatus]
           gi|340007670|gb|AEK26534.1| ribosomal protein subunit S3
           (mitochondrion) [Mimulus guttatus]
           gi|340007671|gb|AEK26535.1| ribosomal protein subunit S3
           (mitochondrion) [Mimulus guttatus]
          Length = 554

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = -1

Query: 568 KMFFGFRLGRCLILHFPKRTFIHLFLPR--RLLKRRGK 461
           K+ FGFRLGRC+I+HFPKRTFIH FLPR  R LKRR K
Sbjct: 50  KLTFGFRLGRCIIIHFPKRTFIHFFLPRRPRRLKRRAK 87


>gb|ACD46917.1| ribosomal protein S3 [Ginkgo biloba]
          Length = 578

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%), Gaps = 2/35 (5%)
 Frame = -1

Query: 559 FGFRLGRCLILHFPKRTFIHLFLPR--RLLKRRGK 461
           FGFRLGRC+I HFPKRTFIHLFLPR  R LKRRGK
Sbjct: 53  FGFRLGRCIIHHFPKRTFIHLFLPRRPRRLKRRGK 87


>gb|ACZ95683.1| ribosomal protein S3 [Ginkgo biloba]
          Length = 578

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%), Gaps = 2/35 (5%)
 Frame = -1

Query: 559 FGFRLGRCLILHFPKRTFIHLFLPR--RLLKRRGK 461
           FGFRLGRC+I HFPKRTFIHLFLPR  R LKRRGK
Sbjct: 53  FGFRLGRCIIHHFPKRTFIHLFLPRRPRRLKRRGK 87