BLASTX nr result

ID: Bupleurum21_contig00033250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033250
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             211   8e-53
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             204   6e-51
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                195   4e-48
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   194   6e-48
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]         187   1e-45

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  211 bits (536), Expect = 8e-53
 Identities = 97/180 (53%), Positives = 135/180 (75%)
 Frame = +3

Query: 3   GRLAAL*RFISRGAERAIPFFDTLRGVKNFQWTPQCGDAFGKIKEYLSTPPLLTKPEGQE 182
           GR+AAL RFISR  ++++PF+  L+G K F W  +C +AFG++K YL+TPP+L+KPE  E
Sbjct: 257 GRIAALNRFISRSTDKSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDE 316

Query: 183 SLQLYLSATDRAVGAVLVKEENGVQKSVFYVSHALKDAETRYPNIEKFALGLVTAARKLR 362
            L LY+S ++ AV  VLV+E+ G QK ++YVS ++ D ETRY  +EK AL +VT+ARKLR
Sbjct: 317 KLYLYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLR 376

Query: 363 HYFQGRSIEVITDQPLKRVLHKPETSGRLIAWAIELGEHDISYKPRTAIKAQALADFITE 542
            YFQ   ++V+T+QPL+ +LH P  SGRL  WA+EL E+DI +K R ++KAQ LADF+TE
Sbjct: 377 PYFQSHPVQVLTNQPLRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTE 436


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  204 bits (520), Expect = 6e-51
 Identities = 97/180 (53%), Positives = 132/180 (73%)
 Frame = +3

Query: 3    GRLAAL*RFISRGAERAIPFFDTLRGVKNFQWTPQCGDAFGKIKEYLSTPPLLTKPEGQE 182
            GR+AAL RFISR  ++ +PF++ L+    F W     +AF K+K+YLSTPP+L KPE  E
Sbjct: 1060 GRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGE 1119

Query: 183  SLQLYLSATDRAVGAVLVKEENGVQKSVFYVSHALKDAETRYPNIEKFALGLVTAARKLR 362
            +L LY++ +D AV +VLV+E+ G Q+ +FY S +L +AETRYP IEK AL +VT+ARKLR
Sbjct: 1120 TLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLR 1179

Query: 363  HYFQGRSIEVITDQPLKRVLHKPETSGRLIAWAIELGEHDISYKPRTAIKAQALADFITE 542
             YFQ  +I V+TDQPL+  LH P  SGR+  WA+EL E+DI ++PR A+K+Q LADF+ E
Sbjct: 1180 PYFQSHTIAVLTDQPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIE 1239


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  195 bits (495), Expect = 4e-48
 Identities = 97/182 (53%), Positives = 130/182 (71%)
 Frame = +3

Query: 3   GRLAAL*RFISRGAERAIPFFDTLRGVKNFQWTPQCGDAFGKIKEYLSTPPLLTKPEGQE 182
           GR+AAL RFISR A++A+PFF  LRG K F W  +   AF  IKE+L   P +T+P+  E
Sbjct: 5   GRMAALTRFISRSADKALPFFQLLRGNKTFTWGEEERTAFAAIKEHLKKLPTVTRPKEGE 64

Query: 183 SLQLYLSATDRAVGAVLVKEENGVQKSVFYVSHALKDAETRYPNIEKFALGLVTAARKLR 362
            LQLY+SA+ + V AVL+ E    Q  +++VSH L +AE RYP +EK +L ++ AARKLR
Sbjct: 65  RLQLYISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLR 124

Query: 363 HYFQGRSIEVITDQPLKRVLHKPETSGRLIAWAIELGEHDISYKPRTAIKAQALADFITE 542
            YF   +I+V+++ PL++ L K +TSGRL+ WA+EL E ++ YKPRTAIKAQALADFI E
Sbjct: 125 PYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVE 184

Query: 543 CS 548
            S
Sbjct: 185 AS 186


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  194 bits (494), Expect = 6e-48
 Identities = 96/182 (52%), Positives = 131/182 (71%)
 Frame = +3

Query: 3   GRLAAL*RFISRGAERAIPFFDTLRGVKNFQWTPQCGDAFGKIKEYLSTPPLLTKPEGQE 182
           GR+AAL RFIS+ A++A+PFF  LRG K F+W  +   AF  IKE+L   P +T+P+  E
Sbjct: 5   GRMAALTRFISKSADKALPFFQLLRGNKTFKWGEEERTAFAAIKEHLKKLPTVTRPKEGE 64

Query: 183 SLQLYLSATDRAVGAVLVKEENGVQKSVFYVSHALKDAETRYPNIEKFALGLVTAARKLR 362
            LQLY+SA+ + V AVL+ E    Q  +++VSH L +AE RYP +EK +L ++ AARKLR
Sbjct: 65  RLQLYISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLR 124

Query: 363 HYFQGRSIEVITDQPLKRVLHKPETSGRLIAWAIELGEHDISYKPRTAIKAQALADFITE 542
            YF   +I+V+++ PL++ L K +TSGRL+ WA+EL E ++ YKPRTAIKAQALADFI E
Sbjct: 125 PYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVE 184

Query: 543 CS 548
            S
Sbjct: 185 AS 186


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score =  187 bits (474), Expect = 1e-45
 Identities = 92/180 (51%), Positives = 118/180 (65%)
 Frame = +3

Query: 3    GRLAAL*RFISRGAERAIPFFDTLRGVKNFQWTPQCGDAFGKIKEYLSTPPLLTKPEGQE 182
            GR+A+L RFIS+ AE+ +PFF  L  VKNFQW+ +C  AF  +K YL  PP L KP+  E
Sbjct: 909  GRMASLIRFISKAAEKGLPFFKVLHNVKNFQWSDECQKAFDDLKGYLLCPPPLVKPQQGE 968

Query: 183  SLQLYLSATDRAVGAVLVKEENGVQKSVFYVSHALKDAETRYPNIEKFALGLVTAARKLR 362
             L +YL+     V AVL + E      ++Y S  LKDA+TRY  IEKFA  LVT A+KLR
Sbjct: 969  RLYVYLAVRKEVVSAVLARAEGRDHLPIYYTSRTLKDAKTRYSLIEKFAFALVTTAQKLR 1028

Query: 363  HYFQGRSIEVITDQPLKRVLHKPETSGRLIAWAIELGEHDISYKPRTAIKAQALADFITE 542
             YF    I ++T  PL+ +L  P+ SGR++ WA+ELGE+DI Y PR AIK Q LADF+ E
Sbjct: 1029 SYFLTHPITILTKHPLRAILSHPQESGRMVKWAVELGEYDIHYAPRPAIKPQVLADFMIE 1088


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