BLASTX nr result

ID: Bupleurum21_contig00033242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033242
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001185427.1| SH2 domain protein B [Arabidopsis thaliana] ...    78   9e-13
ref|NP_177975.3| SH2 domain protein B [Arabidopsis thaliana] gi|...    78   9e-13
gb|AAD30582.1|AC007260_13 Hypothetical protein [Arabidopsis thal...    78   9e-13
ref|XP_002889197.1| hypothetical protein ARALYDRAFT_477018 [Arab...    77   1e-12
ref|NP_173147.2| SH2 domain protein A [Arabidopsis thaliana] gi|...    76   3e-12

>ref|NP_001185427.1| SH2 domain protein B [Arabidopsis thaliana]
           gi|332197998|gb|AEE36119.1| SH2 domain protein B
           [Arabidopsis thaliana]
          Length = 696

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +1

Query: 79  MGSIAMKEKE-YFMLRDFRLEIKNEEQKRRGFSICFWLYLSTSTSFPSILLYQVDADGTC 255
           M S A  E E Y +L DF ++++ ++++   FS+CFW+YL  ST+FPS ++ QV +D + 
Sbjct: 1   MASAATIETEKYSLLEDFNVDVEVDDEEYESFSLCFWVYLLNSTTFPSTIIRQVHSDMSV 60

Query: 256 NVPFLGLNDRKKLMLFPLRFLH 321
           + PFL L++ KK+ML PL  LH
Sbjct: 61  SAPFLVLDENKKMMLLPLTLLH 82


>ref|NP_177975.3| SH2 domain protein B [Arabidopsis thaliana]
           gi|62320412|dbj|BAD94855.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332197997|gb|AEE36118.1| SH2
           domain protein B [Arabidopsis thaliana]
          Length = 668

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +1

Query: 79  MGSIAMKEKE-YFMLRDFRLEIKNEEQKRRGFSICFWLYLSTSTSFPSILLYQVDADGTC 255
           M S A  E E Y +L DF ++++ ++++   FS+CFW+YL  ST+FPS ++ QV +D + 
Sbjct: 1   MASAATIETEKYSLLEDFNVDVEVDDEEYESFSLCFWVYLLNSTTFPSTIIRQVHSDMSV 60

Query: 256 NVPFLGLNDRKKLMLFPLRFLH 321
           + PFL L++ KK+ML PL  LH
Sbjct: 61  SAPFLVLDENKKMMLLPLTLLH 82


>gb|AAD30582.1|AC007260_13 Hypothetical protein [Arabidopsis thaliana]
          Length = 679

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +1

Query: 79  MGSIAMKEKE-YFMLRDFRLEIKNEEQKRRGFSICFWLYLSTSTSFPSILLYQVDADGTC 255
           M S A  E E Y +L DF ++++ ++++   FS+CFW+YL  ST+FPS ++ QV +D + 
Sbjct: 1   MASAATIETEKYSLLEDFNVDVEVDDEEYESFSLCFWVYLLNSTTFPSTIIRQVHSDMSV 60

Query: 256 NVPFLGLNDRKKLMLFPLRFLH 321
           + PFL L++ KK+ML PL  LH
Sbjct: 61  SAPFLVLDENKKMMLLPLTLLH 82


>ref|XP_002889197.1| hypothetical protein ARALYDRAFT_477018 [Arabidopsis lyrata subsp.
           lyrata] gi|297335038|gb|EFH65456.1| hypothetical protein
           ARALYDRAFT_477018 [Arabidopsis lyrata subsp. lyrata]
          Length = 668

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/80 (40%), Positives = 56/80 (70%)
 Frame = +1

Query: 82  GSIAMKEKEYFMLRDFRLEIKNEEQKRRGFSICFWLYLSTSTSFPSILLYQVDADGTCNV 261
           G   ++ ++Y +L DF ++++ ++++   FS+CFW+YL  ST+FPS ++ QV +D + + 
Sbjct: 3   GVSTIETEKYSLLEDFSVDVEVDDEEYESFSLCFWVYLLNSTTFPSTIIRQVHSDMSVSA 62

Query: 262 PFLGLNDRKKLMLFPLRFLH 321
           PFL L++ KK+ML PL  LH
Sbjct: 63  PFLVLDENKKMMLLPLTLLH 82


>ref|NP_173147.2| SH2 domain protein A [Arabidopsis thaliana]
           gi|209529769|gb|ACI49779.1| At1g17040 [Arabidopsis
           thaliana] gi|332191412|gb|AEE29533.1| SH2 domain protein
           A [Arabidopsis thaliana]
          Length = 641

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/80 (41%), Positives = 54/80 (67%)
 Frame = +1

Query: 82  GSIAMKEKEYFMLRDFRLEIKNEEQKRRGFSICFWLYLSTSTSFPSILLYQVDADGTCNV 261
           G  A+  ++Y +L DF ++++ E +    FS+CFW+YL  ST++PS ++ QV +D + + 
Sbjct: 3   GDCAIDTEKYSLLEDFNVDVEVENKAFETFSLCFWVYLLDSTTYPSAIIRQVHSDMSVSA 62

Query: 262 PFLGLNDRKKLMLFPLRFLH 321
           PFL L++ KK+ML PL  LH
Sbjct: 63  PFLVLDENKKMMLLPLTLLH 82


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