BLASTX nr result

ID: Bupleurum21_contig00033215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033215
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...   102   2e-20
gb|AAO85510.1| SKP1 [Nicotiana benthamiana]                           102   3e-20
ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|1...   101   5e-20
emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]      101   7e-20
gb|AAX83944.1| Skp1 [Capsicum annuum]                                 100   1e-19

>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
           gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
           protein 1B-like [Cucumis sativus]
          Length = 157

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/111 (54%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = -2

Query: 390 SDDEIFSVDQSVVLEMQLIKDMIEGGCASGVILLSEISSKTLSKVIEYCKRHAIAHGTEH 211
           SD EIF VD++V LE Q IK MIE  CA   I L  ++SK LSKVIEYCK+H  +   E 
Sbjct: 12  SDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPED 71

Query: 210 LTPGAINDLKAFDLGFVKVDQNTLFDLKLAANFLN--RFLSLLCIFVLNWI 64
            T    +DLK +D  FVKVDQ TLFDL LAAN+LN    L L C  V + I
Sbjct: 72  RTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 122


>gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
          Length = 153

 Score =  102 bits (254), Expect = 3e-20
 Identities = 61/111 (54%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 390 SDDEIFSVDQSVVLEMQLIKDMIEGGCASGVILLSEISSKTLSKVIEYCKRHAIAHGTEH 211
           SD E F V++SV LE Q IK MIE  CA   I L  ++SK L+KVIEYCKRH  A  ++ 
Sbjct: 9   SDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDA-ASKT 67

Query: 210 LTPGAINDLKAFDLGFVKVDQNTLFDLKLAANFLN--RFLSLLCIFVLNWI 64
                 +DLKAFD  FVKVDQ+TLFDL LAAN+LN  R L L C  V + I
Sbjct: 68  EDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMI 118


>ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|118485200|gb|ABK94461.1|
           unknown [Populus trichocarpa]
           gi|222843680|gb|EEE81227.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score =  101 bits (252), Expect = 5e-20
 Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = -2

Query: 390 SDDEIFSVDQSVVLEMQLIKDMIEGGCASGVILLSEISSKTLSKVIEYCKRHAIAHGTEH 211
           SD E F VD++V LE Q IK MIE  CA   I L  ++SK LSKVIEYCK+H     ++ 
Sbjct: 12  SDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYCKKHVETPKSDD 71

Query: 210 LTPGAINDLKAFDLGFVKVDQNTLFDLKLAANFLN--RFLSLLCIFVLNWI 64
               A +DLK++D  FVKVDQ TLFDL LAAN+LN    L L C  V + I
Sbjct: 72  RPSSADDDLKSWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMI 122


>emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]
          Length = 161

 Score =  101 bits (251), Expect = 7e-20
 Identities = 62/116 (53%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
 Frame = -2

Query: 390 SDDEIFSVDQSVVLEMQLIKDMIEGGCASGVILLSEISSKTLSKVIEYCKRH---AIAHG 220
           SD E+F V++S+ LE Q IK MIE  CA  VI L  ++ K LSKVIEYCKRH   A A  
Sbjct: 11  SDGEVFEVEESLALESQTIKHMIEDDCADNVIPLPNVTGKILSKVIEYCKRHVDAAAAKA 70

Query: 219 TEHLTPGAIND--LKAFDLGFVKVDQNTLFDLKLAANFLN--RFLSLLCIFVLNWI 64
            + L     +D  LKAFD  FVKVDQ TLFDL LAAN+LN    L L C  V + I
Sbjct: 71  DDKLASTGTSDDELKAFDADFVKVDQATLFDLILAANYLNIKTLLDLTCQTVADMI 126


>gb|AAX83944.1| Skp1 [Capsicum annuum]
          Length = 156

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 390 SDDEIFSVDQSVVLEMQLIKDMIEGGCASGVILLSEISSKTLSKVIEYCKRHAIAHGTEH 211
           SD E F VD++V LE Q IK MIE  CA+  I L  ++SK LSKV+EYCK+H  A G + 
Sbjct: 12  SDGETFEVDEAVALESQTIKHMIEDDCANTSIPLPNVTSKILSKVVEYCKKHVDA-GAKT 70

Query: 210 LTPGAINDLKAFDLGFVKVDQNTLFDLKLAANFLN--RFLSLLCIFVLNWI 64
               + +DLK+FD  FVKVDQ TLFDL LAAN+LN    L L C  V + I
Sbjct: 71  EDKASEDDLKSFDSEFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMI 121


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