BLASTX nr result

ID: Bupleurum21_contig00033177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033177
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329144.1| predicted protein [Populus trichocarpa] gi|2...   235   5e-60
ref|XP_002317509.1| predicted protein [Populus trichocarpa] gi|2...   231   9e-59
ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBS...   224   1e-56
ref|XP_003540455.1| PREDICTED: CBS domain-containing protein CBS...   218   6e-55
ref|XP_003543253.1| PREDICTED: CBS domain-containing protein CBS...   217   1e-54

>ref|XP_002329144.1| predicted protein [Populus trichocarpa] gi|222869813|gb|EEF06944.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  235 bits (600), Expect = 5e-60
 Identities = 122/218 (55%), Positives = 155/218 (71%), Gaps = 6/218 (2%)
 Frame = -1

Query: 638 PIKTRFN------KTLDVNSTTTHNGGEYCWLTQEDVIRFLLNSIGLFSPTPALTIESLG 477
           PIKTR++      + L + S T HNG E+CWLTQED+IRF L SIGLF+P PAL+I++LG
Sbjct: 142 PIKTRYSTRRKQHQKLSITSPTIHNGREFCWLTQEDIIRFFLGSIGLFAPLPALSIDTLG 201

Query: 476 IISTGYMSVWYHSPASTAIEAISQSLAEQTSVGVVDSDGTLVGEISPFTLAGCDESVAAA 297
           IIST ++++ YHSPA + +EAIS+SLA++TSV V+DSDG L+GE+SPFTLA CD+SVAAA
Sbjct: 202 IISTEFLTIDYHSPAISELEAISRSLADETSVAVIDSDGILIGELSPFTLACCDDSVAAA 261

Query: 296 ITTLSTGDLMSYIDCGGPPQDIIKVVRKRLKEMNLEGMLEEFEIFXXXXXXXXXXXXXXX 117
           ITTLS+GDLM+YIDCGGPP+D++KVV +RLKE  LE ML+EF                  
Sbjct: 262 ITTLSSGDLMAYIDCGGPPEDLVKVVMERLKERGLEAMLQEFT--NSSCYSTTSSCQSQS 319

Query: 116 XXXXXXXXXXXXPFALFRPGRFSRSRSYSARMVRKGEA 3
                          L R G++SRS SYSARMVR+ EA
Sbjct: 320 SSSDEESASSTPVSTLHRSGKYSRSMSYSARMVRRAEA 357


>ref|XP_002317509.1| predicted protein [Populus trichocarpa] gi|222860574|gb|EEE98121.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  231 bits (589), Expect = 9e-59
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 8/220 (3%)
 Frame = -1

Query: 638 PIKTRFNKT--------LDVNSTTTHNGGEYCWLTQEDVIRFLLNSIGLFSPTPALTIES 483
           PIKTR++ +        L + S T HNG E+CWLTQED+IRF L SIGLF+P PAL+I++
Sbjct: 142 PIKTRYSSSSRRKQHQKLSITSPTIHNGREFCWLTQEDIIRFFLGSIGLFAPLPALSIDT 201

Query: 482 LGIISTGYMSVWYHSPASTAIEAISQSLAEQTSVGVVDSDGTLVGEISPFTLAGCDESVA 303
           LGIIST Y+++ YHSPA + +EAIS SLA++ SV ++DSDG L+GE+SPFTLA CDESVA
Sbjct: 202 LGIISTDYLTIDYHSPAISELEAISGSLADENSVAIIDSDGILIGELSPFTLACCDESVA 261

Query: 302 AAITTLSTGDLMSYIDCGGPPQDIIKVVRKRLKEMNLEGMLEEFEIFXXXXXXXXXXXXX 123
           AAITTLS+GDLM+YIDCGGPP D++ +V  RLK   LE ML+EF                
Sbjct: 262 AAITTLSSGDLMAYIDCGGPPDDLVNLVMTRLKGRGLEAMLQEF--------------TN 307

Query: 122 XXXXXXXXXXXXXXPFALFRPGRFSRSRSYSARMVRKGEA 3
                           AL RPG++SRS SYSARMVR+ EA
Sbjct: 308 SSCYSTTSSWSSTPFSALQRPGKYSRSMSYSARMVRRAEA 347


>ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
           gi|302143038|emb|CBI20333.3| unnamed protein product
           [Vitis vinifera]
          Length = 394

 Score =  224 bits (571), Expect = 1e-56
 Identities = 116/198 (58%), Positives = 143/198 (72%)
 Frame = -1

Query: 596 TTTHNGGEYCWLTQEDVIRFLLNSIGLFSPTPALTIESLGIISTGYMSVWYHSPASTAIE 417
           TT H G EYCWLTQEDV+R+LL+SIGL SP  AL I++L II T  +++ YHSPAS+++ 
Sbjct: 150 TTMHKGCEYCWLTQEDVVRYLLSSIGLLSPIAALPIDTLRIIDTDVLAINYHSPASSSLP 209

Query: 416 AISQSLAEQTSVGVVDSDGTLVGEISPFTLAGCDESVAAAITTLSTGDLMSYIDCGGPPQ 237
           AI +SL +QTSV VVD +G L+GEISPFTLA CDE+VAAAITTLS+GDLMSYIDCGGPP+
Sbjct: 210 AILRSLRDQTSVAVVDENGALIGEISPFTLACCDETVAAAITTLSSGDLMSYIDCGGPPE 269

Query: 236 DIIKVVRKRLKEMNLEGMLEEFEIFXXXXXXXXXXXXXXXXXXXXXXXXXXXPFALFRPG 57
           +I+K V+ RLK+ NLEGMLEEF +                              AL+RPG
Sbjct: 270 EIVKTVKTRLKQRNLEGMLEEFAL-------DSSSTSSLSASSSDEESSPSPKTALYRPG 322

Query: 56  RFSRSRSYSARMVRKGEA 3
           ++SRS SYSARMVR+ EA
Sbjct: 323 KYSRSSSYSARMVRRAEA 340


>ref|XP_003540455.1| PREDICTED: CBS domain-containing protein CBSX5-like [Glycine max]
          Length = 390

 Score =  218 bits (556), Expect = 6e-55
 Identities = 112/200 (56%), Positives = 143/200 (71%)
 Frame = -1

Query: 602 NSTTTHNGGEYCWLTQEDVIRFLLNSIGLFSPTPALTIESLGIISTGYMSVWYHSPASTA 423
           ++  +H+  E+CWLTQEDVIRFLL SIG+F+P PAL+I+SLGI+S+  +++ Y+SPAS+ 
Sbjct: 145 STINSHSSCEFCWLTQEDVIRFLLGSIGVFTPLPALSIDSLGIVSSDVLAIDYYSPASST 204

Query: 422 IEAISQSLAEQTSVGVVDSDGTLVGEISPFTLAGCDESVAAAITTLSTGDLMSYIDCGGP 243
           + AIS+SLA+QTSV +VDSDGT +GEISPFTLA CDE+VAAA+ TLS GDLM+YIDCGGP
Sbjct: 205 VGAISKSLAQQTSVAIVDSDGTFIGEISPFTLACCDETVAAAMATLSAGDLMAYIDCGGP 264

Query: 242 PQDIIKVVRKRLKEMNLEGMLEEFEIFXXXXXXXXXXXXXXXXXXXXXXXXXXXPFALFR 63
           P+D+++VV+ RLKE NLE ML+EF I                                 R
Sbjct: 265 PEDLVRVVKARLKEKNLEKMLQEFTILSSCESSQLASSSSSSDEESTTRTPA-------R 317

Query: 62  PGRFSRSRSYSARMVRKGEA 3
            GR +RS SYSARMVRK EA
Sbjct: 318 SGRLARSSSYSARMVRKAEA 337


>ref|XP_003543253.1| PREDICTED: CBS domain-containing protein CBSX5-like [Glycine max]
          Length = 389

 Score =  217 bits (553), Expect = 1e-54
 Identities = 112/200 (56%), Positives = 142/200 (71%)
 Frame = -1

Query: 602 NSTTTHNGGEYCWLTQEDVIRFLLNSIGLFSPTPALTIESLGIISTGYMSVWYHSPASTA 423
           ++  +H+  E+CWLTQEDVIRFLL SIG+F+P PAL+I+SLGIIS+  +++ Y+SPAS+A
Sbjct: 148 STINSHSSCEFCWLTQEDVIRFLLGSIGVFTPLPALSIDSLGIISSDVLAIDYYSPASSA 207

Query: 422 IEAISQSLAEQTSVGVVDSDGTLVGEISPFTLAGCDESVAAAITTLSTGDLMSYIDCGGP 243
           + AIS+SL +QTSV +VDSDGT +GEISPFTLA CDE+VAAAI TLS GDLM+YIDCGGP
Sbjct: 208 VGAISKSLTQQTSVAIVDSDGTFIGEISPFTLACCDETVAAAIATLSAGDLMAYIDCGGP 267

Query: 242 PQDIIKVVRKRLKEMNLEGMLEEFEIFXXXXXXXXXXXXXXXXXXXXXXXXXXXPFALFR 63
           P+D++++V+ RLKE N E ML+EF I                                 R
Sbjct: 268 PEDLVRLVKARLKEKNFEKMLQEFTILSSCESSQSTSSDEELPTRTPA-----------R 316

Query: 62  PGRFSRSRSYSARMVRKGEA 3
            GR +RS SYSARMVRK EA
Sbjct: 317 SGRLARSSSYSARMVRKAEA 336


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