BLASTX nr result
ID: Bupleurum21_contig00033173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00033173
(330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab... 85 7e-15
gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana] 84 1e-14
ref|NP_172730.3| helicase domain and pentatricopeptide repeat-co... 84 1e-14
emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein... 84 1e-14
sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide... 84 1e-14
>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 84.7 bits (208), Expect = 7e-15
Identities = 43/105 (40%), Positives = 62/105 (59%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK E A ELF +M G++PD T G ++ GLC N + +AL +F L+ + L I +Y
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLCSQ 2
II+G G + A +F LP KG+KP+V TYT++I LC +
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -3
Query: 310 CET--ALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
C+T A + K+ + G PDT T T+I+GLC + +EA+ L + G + ++ Y
Sbjct: 114 CKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTY 173
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
NSI+ G GD A + + + +K DV TY+ +I+SLC
Sbjct: 174 NSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216
Score = 64.3 bits (155), Expect = 1e-08
Identities = 34/102 (33%), Positives = 54/102 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K G AL+L KM E + D +T T+I LC + A+SLF +ET G K +
Sbjct: 182 KSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLV 241
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIE 17
YNS++ G G + ++ D+ S+ + P+V T+ +LI+
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/102 (29%), Positives = 53/102 (51%)
Frame = -3
Query: 313 KCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLYN 134
K A+ L +M E+G P+ T ++++G+C + T+ AL L ++ K + Y+
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209
Query: 133 SIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+II G D A +F ++ +KG+K + TY L+ LC
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/105 (30%), Positives = 54/105 (51%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K GK + A EL+ +M GI P+T T +++ G C +R +EA ++ ++ I
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+ S+IKG D K+F + +GL + TY+IL++ C
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/105 (26%), Positives = 55/105 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K+ + + ++LF K+ + G++ +T T ++ G C + + A LF + + G +
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
Y ++ G +G + A +IF+DL + D+ YTI+IE +C
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
>gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK + A ELF +M G++PD T G ++ GLC N + +AL +F L+ + L I +Y
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 466
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLCSQ 2
+II+G G + A +F LP KG+KP+V TYT++I LC +
Sbjct: 467 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511
Score = 68.2 bits (165), Expect = 7e-10
Identities = 35/106 (33%), Positives = 56/106 (52%)
Frame = -3
Query: 325 FKMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHI 146
F GK A+ L ++M E+G PD T ++++G+C + T+ AL L +E K +
Sbjct: 159 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 218
Query: 145 GLYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
Y++II G D A +F ++ +KG+K V TY L+ LC
Sbjct: 219 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Score = 64.7 bits (156), Expect = 7e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
+ G AL+L KM+E + D +T T+I LC + A+SLF +ET G K +
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIE 17
YNS+++G G + + D+ S+ + P+V T+ +L++
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K GK + A EL+ +M GI P+ T T++ G C +R +EA ++ ++ I
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+ S+IKG M D K+F ++ +GL + TY+IL++ C
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Score = 58.2 bits (139), Expect = 7e-07
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -3
Query: 310 CET--ALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
C+T A + K+ + G PDT T T+I GL + +EA+ L + G + + Y
Sbjct: 127 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 186
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
NSI+ G GD A + + + +K DV TY+ +I+SLC
Sbjct: 187 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 229
>ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana] gi|332190794|gb|AEE28915.1|
helicase domain and pentatricopeptide repeat-containing
protein [Arabidopsis thaliana]
Length = 735
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK + A ELF +M G++PD T G ++ GLC N + +AL +F L+ + L I +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLCSQ 2
+II+G G + A +F LP KG+KP+V TYT++I LC +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Score = 68.2 bits (165), Expect = 7e-10
Identities = 35/106 (33%), Positives = 56/106 (52%)
Frame = -3
Query: 325 FKMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHI 146
F GK A+ L ++M E+G PD T ++++G+C + T+ AL L +E K +
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 228
Query: 145 GLYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
Y++II G D A +F ++ +KG+K V TY L+ LC
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Score = 64.7 bits (156), Expect = 7e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
+ G AL+L KM+E + D +T T+I LC + A+SLF +ET G K +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIE 17
YNS+++G G + + D+ S+ + P+V T+ +L++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K GK + A EL+ +M GI P+ T T++ G C +R +EA ++ ++ I
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+ S+IKG M D K+F ++ +GL + TY+IL++ C
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Score = 58.2 bits (139), Expect = 7e-07
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -3
Query: 310 CET--ALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
C+T A + K+ + G PDT T T+I GL + +EA+ L + G + + Y
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
NSI+ G GD A + + + +K DV TY+ +I+SLC
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
>emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK + A ELF +M G++PD T G ++ GLC N + +AL +F L+ + L I +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLCSQ 2
+II+G G + A +F LP KG+KP+V TYT++I LC +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Score = 64.7 bits (156), Expect = 7e-09
Identities = 32/103 (31%), Positives = 54/103 (52%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK A+ L ++M E+G PD T ++++G+C + T+ A + +E K + Y
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
++II G D A +F ++ +KG+K V TY L+ LC
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Score = 62.4 bits (150), Expect = 4e-08
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
+ G A ++ KM+E + D +T T+I LC + A+SLF +ET G K +
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIE 17
YNS+++G G + + D+ S+ + P+V T+ +L++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 60.1 bits (144), Expect = 2e-07
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = -3
Query: 310 CET--ALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
C+T A + K+ + G PDT T T+I+GLC + ++A+ L + G + + Y
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTY 196
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
NSI+ G GD A + + + +K DV TY+ +I+SLC
Sbjct: 197 NSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K GK + A EL+ +M GI P+ T T++ G C +R +EA ++ ++ I
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+ S+IKG M D K+F ++ +GL + TY+IL++ C
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
>sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = -3
Query: 316 GKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
GK + A ELF +M G++PD T G ++ GLC N + +AL +F L+ + L I +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLCSQ 2
+II+G G + A +F LP KG+KP+V TYT++I LC +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Score = 68.2 bits (165), Expect = 7e-10
Identities = 35/106 (33%), Positives = 56/106 (52%)
Frame = -3
Query: 325 FKMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHI 146
F GK A+ L ++M E+G PD T ++++G+C + T+ AL L +E K +
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 228
Query: 145 GLYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
Y++II G D A +F ++ +KG+K V TY L+ LC
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Score = 64.7 bits (156), Expect = 7e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
+ G AL+L KM+E + D +T T+I LC + A+SLF +ET G K +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIE 17
YNS+++G G + + D+ S+ + P+V T+ +L++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = -3
Query: 322 KMGKCETALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIG 143
K GK + A EL+ +M GI P+ T T++ G C +R +EA ++ ++ I
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 142 LYNSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
+ S+IKG M D K+F ++ +GL + TY+IL++ C
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Score = 58.2 bits (139), Expect = 7e-07
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -3
Query: 310 CET--ALELFNKMQESGIMPDTYTNGTVIHGLCYNDRTAEALSLFLMLETTGEKLHIGLY 137
C+T A + K+ + G PDT T T+I GL + +EA+ L + G + + Y
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 136 NSIIKGSSMHGDHDTARKIFDDLPSKGLKPDVQTYTILIESLC 8
NSI+ G GD A + + + +K DV TY+ +I+SLC
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239