BLASTX nr result

ID: Bupleurum21_contig00033171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033171
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53
ref|XP_002297673.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53
ref|XP_002513434.1| ATP binding protein, putative [Ricinus commu...   203   2e-50
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              201   1e-49
ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...   195   7e-48

>ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|222846513|gb|EEE84060.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  212 bits (539), Expect = 5e-53
 Identities = 106/214 (49%), Positives = 133/214 (62%), Gaps = 1/214 (0%)
 Frame = +1

Query: 1   WISEPFSGKAFNAAFNDTGNFRIVGSESLTLWDTFSYPTDTLLPTQTMGVYGKLSSRRTE 180
           W S P +G+A     NDTGNF +  +    LW +F   TDTLLPTQ M   G LSSR +E
Sbjct: 112 WKSGPGNGEAAYGFMNDTGNFLVANANGEKLWQSFELLTDTLLPTQIMEKGGILSSRLSE 171

Query: 181 TNFTRGRFQLRLLDDGNLVLNTRNILTDFPYDAYYWSNTYDTDPSKKGYQVKFNESGYMY 360
           TNF++GRFQ RL+ DGN VLNT N+ T FPY+AY+WS T D++ S  GYQV FNESGY+Y
Sbjct: 172 TNFSQGRFQFRLIPDGNAVLNTINLPTGFPYEAYFWSKTVDSNSSNAGYQVVFNESGYLY 231

Query: 361 VLRRNEDRVDLTPSSTSREILSTGHYHRVTLNYDGVLVQYYHPKVFTETTKWTIVSQEPK 540
           VLR N  R  LT     R + +T +YHR TL++DGV V Y HPK       W++V   P+
Sbjct: 232 VLRANNTREALT---LGRVVPATENYHRATLHFDGVFVLYSHPKNSPGNENWSVVRTMPE 288

Query: 541 NICTAINERLGGGACGFNGICKFDGSRNDF-ECP 639
           NICT +    G G CG+NG+C     +     CP
Sbjct: 289 NICTVVRGLKGSGPCGYNGVCTISTDKRAICRCP 322


>ref|XP_002297673.1| predicted protein [Populus trichocarpa] gi|222844931|gb|EEE82478.1|
           predicted protein [Populus trichocarpa]
          Length = 752

 Score =  212 bits (539), Expect = 5e-53
 Identities = 106/214 (49%), Positives = 133/214 (62%), Gaps = 1/214 (0%)
 Frame = +1

Query: 1   WISEPFSGKAFNAAFNDTGNFRIVGSESLTLWDTFSYPTDTLLPTQTMGVYGKLSSRRTE 180
           W S P +G+A     NDTGNF +  +    LW +F   TDTLLPTQ M   G LSSR +E
Sbjct: 89  WKSGPGNGEAAYGFMNDTGNFLVANANGEKLWQSFELLTDTLLPTQIMEKGGILSSRLSE 148

Query: 181 TNFTRGRFQLRLLDDGNLVLNTRNILTDFPYDAYYWSNTYDTDPSKKGYQVKFNESGYMY 360
           TNF++GRFQ RL+ DGN VLNT N+ T FPY+AY+WS T D++ S  GYQV FNESGY+Y
Sbjct: 149 TNFSQGRFQFRLIPDGNAVLNTINLPTGFPYEAYFWSKTVDSNSSNAGYQVVFNESGYLY 208

Query: 361 VLRRNEDRVDLTPSSTSREILSTGHYHRVTLNYDGVLVQYYHPKVFTETTKWTIVSQEPK 540
           VLR N  R  LT     R + +T +YHR TL++DGV V Y HPK       W++V   P+
Sbjct: 209 VLRANNTREALT---LGRVVPATENYHRATLHFDGVFVLYSHPKNSPGNENWSVVRTMPE 265

Query: 541 NICTAINERLGGGACGFNGICKFDGSRNDF-ECP 639
           NICT +    G G CG+NG+C     +     CP
Sbjct: 266 NICTVVRGLKGSGPCGYNGVCTISTDKRAICRCP 299


>ref|XP_002513434.1| ATP binding protein, putative [Ricinus communis]
           gi|223547342|gb|EEF48837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 800

 Score =  203 bits (517), Expect = 2e-50
 Identities = 107/215 (49%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
 Frame = +1

Query: 1   WISEPFSGKAFNAAFNDTGNFRIVGSESLTLWDTFSYPTDTLLPTQTMGVYGK-LSSRRT 177
           W S    G A     NDTGNFRIV +    LW TF  P DTLLP Q +   GK LSSR  
Sbjct: 113 WKSGINIGDAARGMMNDTGNFRIVNTGGEKLWQTFDDPKDTLLPGQALERGGKILSSRLR 172

Query: 178 ETNFTRGRFQLRLLDDGNLVLNTRNILTDFPYDAYYWSNTYDTDPSKKGYQVKFNESGYM 357
           ETNF+RGRFQ RL+ DGN VLN  N+ T   YDAYYW+NT D + S  G ++ FNESGY+
Sbjct: 173 ETNFSRGRFQFRLIPDGNGVLNANNLRTGDAYDAYYWTNTVDANLSNAGLRIVFNESGYL 232

Query: 358 YVLRRNEDRVDLTPSSTSREILSTGHYHRVTLNYDGVLVQYYHPKVFTETTKWTIVSQEP 537
           Y LR +  R  +TP    R + +T +YHRVTLN+DGVL QY HPK  T+   W+I+   P
Sbjct: 233 YTLRASNKRELITP---ERVVPTTEYYHRVTLNFDGVLTQYSHPKNSTDNGNWSIIFSAP 289

Query: 538 KNICTAINERLGGGACGFNGICKFDGSRNDF-ECP 639
           +NIC  I + +G G CGFN +C+ +  +     CP
Sbjct: 290 ENICFLITD-IGTGPCGFNSVCQLNADQRAICRCP 323


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  201 bits (511), Expect = 1e-49
 Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 2/204 (0%)
 Frame = +1

Query: 34  NAAFNDTGNFRIVGSESLTLWDTFSYPTDTLLPTQTMGVYGKLSSRRTETNFTRGRFQLR 213
           +   NDTGNF +    S  LW++F+ PTDTLLPTQ M V G +SSRRTETNF+ GRFQLR
Sbjct: 161 SGVMNDTGNFVLQNRNSFRLWESFNNPTDTLLPTQIMEVGGVVSSRRTETNFSLGRFQLR 220

Query: 214 LLDDGNLVLNTRNILTDFPYDAYYWSNTYD-TDPSKKGYQVKFNESGYMYVLRRNEDRVD 390
           LLD+GNLVLN  N+ T F YD YY S T D ++ S  GY++ FNESGYMY+LRRN    D
Sbjct: 221 LLDNGNLVLNYMNLPTKFVYDDYYSSETSDASNSSNSGYRLIFNESGYMYILRRNGLIED 280

Query: 391 LTPSSTSREILSTGHYHRVTLNYDGVLVQYYHPKVFTETTKWTIVSQEPKNICTAINERL 570
           LT ++    + +   YHR TLN+DGV  QY++PK  +    W+ V  +P +IC  +   L
Sbjct: 281 LTKTA----LPTIDFYHRATLNFDGVFTQYFYPKASSGNRSWSSVWSKPDDICVNMGADL 336

Query: 571 GGGACGFNGICKFDG-SRNDFECP 639
           G GACG+N IC      R + +CP
Sbjct: 337 GSGACGYNSICNLKADKRPECKCP 360


>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  195 bits (495), Expect = 7e-48
 Identities = 105/216 (48%), Positives = 131/216 (60%), Gaps = 3/216 (1%)
 Frame = +1

Query: 1   WISEPFSGKAFNAAFNDTGNFRIVGSESLTLWDTFSYPTDTLLPTQTMGVYGKLSSRRTE 180
           W SE   G     A  DTGNF +    S  LW++F  P DTLLP+Q +     LSSR++E
Sbjct: 112 WRSETIIGDVAYGAMTDTGNFVLRDRVSDKLWESFKNPADTLLPSQVLDRGMTLSSRQSE 171

Query: 181 TNFTRGRFQLRLLDDGNLVLNTRNILTDFPYDAYYWSNT-YDTDPSKKGYQVKFNESGYM 357
           TNF+ GRFQL+L DDGNLVL T N+ +D+  + YY S T    D S  GYQV FNESGY+
Sbjct: 172 TNFSMGRFQLKLRDDGNLVLATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGYL 231

Query: 358 YVLRRNEDRVDLTPSSTSREILSTG-HYHRVTLNYDGVLVQYYHPKVFTETTKWTIVSQE 534
           Y+LR+N+    LT   T+    STG  YHR TLN+DGV  QYYHPK  T   +WT +  +
Sbjct: 232 YILRKNDQIFSLTQRVTA----STGDFYHRATLNFDGVFTQYYHPKASTGNERWTPIWSQ 287

Query: 535 PKNICTAINERLGGGACGFNGICKFDG-SRNDFECP 639
           P NIC A +   G G CGFN +C+ +   R   ECP
Sbjct: 288 PDNICQASSVSAGSGTCGFNSVCRLNSDGRPICECP 323


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