BLASTX nr result

ID: Bupleurum21_contig00033138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033138
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_003517890.1| PREDICTED: protein SRG1-like [Glycine max]         84   9e-15
gb|AFK39688.1| unknown [Lotus japonicus]                               83   2e-14
ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|AFK41350.1| unknown [Lotus japonicus]                               83   3e-14

>ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|222847580|gb|EEE85127.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 54/100 (54%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
 Frame = +3

Query: 45  ARLGGSISVPSVQELVAKEQPKAVPSRYIRTDQHP-IISDSKAPL--EIPVIDMNLLVDG 215
           A LG S+ VP VQEL AKE P  VP+RY+R DQ P II++++     +IPVIDM  LV  
Sbjct: 4   ATLGKSLLVPCVQEL-AKESPATVPTRYLRLDQDPPIINNNEVASLPQIPVIDMRRLVSE 62

Query: 216 ---DLETAKTFDDACRAWGFFQLTNHGVSTSLLDKVIKAI 326
              DLE  K  D AC+ WGFFQL NHGV  SL++KV + I
Sbjct: 63  EQMDLELDK-MDRACKEWGFFQLINHGVDDSLVNKVKEGI 101


>ref|XP_003517890.1| PREDICTED: protein SRG1-like [Glycine max]
          Length = 354

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = +3

Query: 30  MEETHARLGGSISVPSVQELVAKEQPKAVPSRYIRTDQHPIISDSKAPLEIPVIDMNLLV 209
           M+    +LG S+ VPSV EL AK+    VP RY+R +Q P++SD+ +  ++PVID+N L 
Sbjct: 1   MDSQMTKLGTSLLVPSVHEL-AKQPMTKVPERYVRLNQDPVVSDTISLPQVPVIDLNKLF 59

Query: 210 DGDLETAKTFDDACRAWGFFQLTNHGVSTSLLDKV 314
             D    +  + AC+ WGFFQL NHGV+  L+  V
Sbjct: 60  SEDGTEVEKLNQACKEWGFFQLINHGVNPLLVQNV 94


>gb|AFK39688.1| unknown [Lotus japonicus]
          Length = 356

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +3

Query: 48  RLGGSISVPSVQELVAKEQPKAVPSRYIRTDQHP-IISDSKAPLEIPVIDMNLLVDGDLE 224
           +LG S++VPSVQEL AK+    VP +Y+R +Q P +IS++ +  ++PVID N L   D  
Sbjct: 8   KLGTSLAVPSVQEL-AKQPITKVPEQYVRPNQEPPVISNTTSLPQVPVIDFNKLFSDDGA 66

Query: 225 TAKTFDDACRAWGFFQLTNHGVSTSLLDKV 314
             +  D AC+ WGFFQL NHGV+ SL++K+
Sbjct: 67  ELEKLDHACKEWGFFQLINHGVNHSLVEKM 96


>ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
 Frame = +3

Query: 30  MEETHARLGGSISVPSVQELVAKEQPKAVPSRYIRTDQ-HPIISDSKAPLEIPVIDMNLL 206
           M    + LG S+ VP VQEL AK+   AVP RYIR DQ HPII+      E+PVIDM  L
Sbjct: 1   MASKPSSLGSSLLVPCVQEL-AKDLLVAVPPRYIRYDQEHPIIASHDPVSEVPVIDMQRL 59

Query: 207 VDGDLETAKT--FDDACRAWGFFQLTNHGVSTSLLDKV 314
           +D +   ++      AC+ WGFFQL NH VS+SLLDK+
Sbjct: 60  LDQETMDSELGRLHFACKTWGFFQLVNHCVSSSLLDKM 97


>gb|AFK41350.1| unknown [Lotus japonicus]
          Length = 356

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +3

Query: 48  RLGGSISVPSVQELVAKEQPKAVPSRYIRTDQHP-IISDSKAPLEIPVIDMNLLVDGDLE 224
           +LG S++VPSVQEL AK+    VP +Y+R +Q P +IS++ +  ++PVID N L   D  
Sbjct: 8   KLGTSLAVPSVQEL-AKQPITKVPEQYVRPNQEPPVISNTTSLPQVPVIDFNKLFSDDGV 66

Query: 225 TAKTFDDACRAWGFFQLTNHGVSTSLLDKV 314
             +  D AC+ WGFFQL NHGV+ SL++K+
Sbjct: 67  ELEKLDHACKEWGFFQLINHGVNHSLVEKM 96


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