BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033102
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    84   9e-15
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    79   5e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                76   2e-12
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    74   9e-12
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              72   4e-11

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/101 (39%), Positives = 63/101 (62%)
 Frame = +1

Query: 1    ADDVLVFCKGNLESVNCM*SAFR*FCNISGMTLSTSKSVCFFSNVGSPVAQSILGCIGFD 180
            ADD++VF  G+  S+  + + F+ F   SG+ +S  KS  F +++ S    SIL    FD
Sbjct: 959  ADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFD 1018

Query: 181  RGELPITYLGLPLVTGRLSAANCQSLIVRLCTRINLWTSRF 303
             G LP+ YLGLPL+T R++ A+C  L+ ++ +RI+ W +RF
Sbjct: 1019 SGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRF 1059


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/101 (39%), Positives = 61/101 (60%)
 Frame = +1

Query: 1   ADDVLVFCKGNLESVNCM*SAFR*FCNISGMTLSTSKSVCFFSNVGSPVAQSILGCIGFD 180
           ADD+++   G + S++ +      F   SG+ +S  KS  + + V + V Q I+    FD
Sbjct: 592 ADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFD 651

Query: 181 RGELPITYLGLPLVTGRLSAANCQSLIVRLCTRINLWTSRF 303
            G+LP+ YLGLPLV+ RL+A++C  LI +L  +I  WTSRF
Sbjct: 652 VGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRF 692


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/101 (39%), Positives = 57/101 (56%)
 Frame = +1

Query: 1   ADDVLVFCKGNLESVNCM*SAFR*FCNISGMTLSTSKSVCFFSNVGSPVAQSILGCIGFD 180
           ADD++V   G   S+  +   F  FC  SG+ +S  KS  + + V   + Q I     FD
Sbjct: 351 ADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFD 410

Query: 181 RGELPITYLGLPLVTGRLSAANCQSLIVRLCTRINLWTSRF 303
            G+LP+ YLGLPLVT RL++A+   L+ ++  RI  WT RF
Sbjct: 411 VGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRF 451


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/101 (35%), Positives = 55/101 (54%)
 Frame = +1

Query: 1    ADDVLVFCKGNLESVNCM*SAFR*FCNISGMTLSTSKSVCFFSNVGSPVAQSILGCIGFD 180
            ADD++V   G + S+  +   F  F   SG+ +S  KS  + + + +     +     F 
Sbjct: 704  ADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFS 763

Query: 181  RGELPITYLGLPLVTGRLSAANCQSLIVRLCTRINLWTSRF 303
             G+LP+ YLGLPL+T RLS  +C  L+ ++  RI  WTSRF
Sbjct: 764  SGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRF 804


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/101 (36%), Positives = 56/101 (55%)
 Frame = +1

Query: 1   ADDVLVFCKGNLESVNCM*SAFR*FCNISGMTLSTSKSVCFFSNVGSPVAQSILGCIGFD 180
           ADD++V   G + S++ +   F  F   SG+ +S  KS  + + V   V   I     FD
Sbjct: 231 ADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFD 290

Query: 181 RGELPITYLGLPLVTGRLSAANCQSLIVRLCTRINLWTSRF 303
            G+LP+ YLGLPLVT RL+A +   L+  +  +I  WT+R+
Sbjct: 291 VGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRY 331