BLASTX nr result

ID: Bupleurum21_contig00033041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033041
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05094.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   4e-07
gb|EAY90872.1| hypothetical protein OsI_12479 [Oryza sativa Indi...    57   2e-06
ref|NP_001051148.1| Os03g0728600 [Oryza sativa Japonica Group] g...    57   2e-06
ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>dbj|BAK05094.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 209

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -2

Query: 403 EKLQDKSKELSSNGELFTPSDVERAIWSAAVAAKFPALP 287
           EKLQDK++ELS  GE FTPSDVERA+WS+A+A+K P  P
Sbjct: 164 EKLQDKAEELSVGGESFTPSDVERALWSSAIASKPPKAP 202


>gb|EAY90872.1| hypothetical protein OsI_12479 [Oryza sativa Indica Group]
           gi|125587789|gb|EAZ28453.1| hypothetical protein
           OsJ_12435 [Oryza sativa Japonica Group]
          Length = 219

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -2

Query: 403 EKLQDKSKELSSNGELFTPSDVERAIWSAAVAAKFPALPNSQEIEATS 260
           EKLQ KSKELSS  E+FT SDVERA+WS+AVA+K    P   ++E  S
Sbjct: 164 EKLQTKSKELSSGEEVFTTSDVERALWSSAVASKSLKAPPGNDLENKS 211


>ref|NP_001051148.1| Os03g0728600 [Oryza sativa Japonica Group]
           gi|50428708|gb|AAT77059.1| expressed protein [Oryza
           sativa Japonica Group] gi|108710877|gb|ABF98672.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113549619|dbj|BAF13062.1| Os03g0728600 [Oryza sativa
           Japonica Group] gi|215741460|dbj|BAG97955.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 139

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -2

Query: 403 EKLQDKSKELSSNGELFTPSDVERAIWSAAVAAKFPALPNSQEIEATS 260
           EKLQ KSKELSS  E+FT SDVERA+WS+AVA+K    P   ++E  S
Sbjct: 84  EKLQTKSKELSSGEEVFTTSDVERALWSSAVASKSLKAPPGNDLENKS 131


>ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|222844110|gb|EEE81657.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 34/43 (79%)
 Frame = -2

Query: 403 EKLQDKSKELSSNGELFTPSDVERAIWSAAVAAKFPALPNSQE 275
           +KLQ KSKELSS  ++FTPSD+ERA+WS+AV AK  AL +  +
Sbjct: 160 DKLQTKSKELSSVRDIFTPSDIERALWSSAVGAKLLALQSDPD 202


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