BLASTX nr result

ID: Bupleurum21_contig00033026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033026
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ00032.1| telomerase reverse transcriptase, partial [Nicoti...    65   4e-09
gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicoti...    65   4e-09
ref|XP_002518298.1| telomerase reverse transcriptase, putative [...    65   6e-09
emb|CBI24880.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-...    62   6e-08

>gb|AFJ00032.1| telomerase reverse transcriptase, partial [Nicotiana
           tomentosiformis]
          Length = 511

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 9   CFHRNHSCITGSTCLYHSILKHIKDLIRKAHVCKHANFLEKHCRVPSFD 155
           C H ++     STCLYHSI+K +K LIRKAH C+H   LEKHC  PS D
Sbjct: 224 CTHSSNCTFIRSTCLYHSIIKLLKTLIRKAHHCQHVRLLEKHCSTPSLD 272


>gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicotiana
           tomentosiformis]
          Length = 668

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 9   CFHRNHSCITGSTCLYHSILKHIKDLIRKAHVCKHANFLEKHCRVPSFD 155
           C H ++     STCLYHSI+K +K LIRKAH C+H   LEKHC  PS D
Sbjct: 226 CTHSSNCTFIRSTCLYHSIIKLLKTLIRKAHHCQHVRLLEKHCSTPSLD 274


>ref|XP_002518298.1| telomerase reverse transcriptase, putative [Ricinus communis]
           gi|223542518|gb|EEF44058.1| telomerase reverse
           transcriptase, putative [Ricinus communis]
          Length = 1224

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +3

Query: 9   CFHRNHSCITGSTCLYHSILKHIKDLIRKAHVCKHANFLEKHCRVPSFDLKSPEDPSIRV 188
           C H +  C+ GS CLYHS++K +K LIR+   CKH + L+KHC VPS      ++ S   
Sbjct: 460 CSHSSSFCLLGSACLYHSLIKFLKTLIRRNRCCKHLHLLDKHCAVPSLTQAMNQNASSLF 519

Query: 189 VGHRIMM 209
              RI++
Sbjct: 520 EKRRILL 526


>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 9   CFHRNHSCITGSTCLYHSILKHIKDLIRKAHVCKHANFLEKHCRVPSFDLKSPEDPSIRV 188
           CFH   SC+ GS CLYHS++  +  LIRK   C+H   L+KHC +PS    + E+     
Sbjct: 359 CFHNTASCLIGSACLYHSLVSLLTLLIRKTQSCRHLRLLDKHCAIPSLGRNANENALFMS 418

Query: 189 VGHRIMMNDSSIIKASAK-LTEDMSPDKSIC 278
              +  +++S  +K +   L+     ++S C
Sbjct: 419 EVSKSHVHESKHLKKTLNVLSHQFELNRSYC 449


>ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
          Length = 1181

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = +3

Query: 3   VGCFHRNHSCITGSTCLYHSILKHIKDLIRKAHVCKHANFLEKHCRVPSFDL 158
           + C H N +C+  S CLYHS++K  K LIR+   C+H   L KHC VPS DL
Sbjct: 422 ISCLHSNGTCLIDSGCLYHSLVKWFKHLIRRTRYCQHTKLLNKHC-VPSLDL 472


Top