BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033000
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]              847   0.0  
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   847   0.0  
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   819   0.0  
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   817   0.0  
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...   816   0.0  

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  847 bits (2187), Expect = 0.0
 Identities = 422/489 (86%), Positives = 451/489 (92%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            + VF++LVDS+GKAGRLDTSMKVYMEMQGFGL+PSATM+VSLI+SFVKAGKLETALRIWD
Sbjct: 267  FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWD 326

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
            EMKKAGFRPNYGLYTM+VESHAKSGKLE AMSVFSDMEKAGFLPTPSTYSCLLEMH+A+G
Sbjct: 327  EMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASG 386

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDVCASD 542
            QVD AMKLYNSMTNAGLRPGLSTYT+                   EMKAMG+SVDV ASD
Sbjct: 387  QVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSASD 446

Query: 543  VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSA 722
            VLMVYIKD SVDLALRWLRFM SSG+RTNNFI+RQLFESCMKNGLYESAKPLLETYVNSA
Sbjct: 447  VLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSA 506

Query: 723  AKVDLILYTSILAHLVRCQEEDNEKHLMLILSATRHKAHTFMCGLFTGPEQRKQPVLSFV 902
            AKVDLILYTSILAHLVRCQEE NE+HLMLILSAT+HKAHTFMCGLFTGPEQRKQPVLSFV
Sbjct: 507  AKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPVLSFV 566

Query: 903  REFFQGIDYEMEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIA 1082
            REFFQ +DYE+EEGAA+YF          MGQINRARCVWKVAYENKLFPKAIVFDQHIA
Sbjct: 567  REFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIA 626

Query: 1083 WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP 1262
            WSLDVRNLSVGAAL+AVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIV+AQML+SVESP
Sbjct: 627  WSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVESP 686

Query: 1263 FEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSRADILMHKLNILFPSSAPELRSLSPP 1442
            FEVSKVVLRAPGDSV+EWFKKPIVQQFL+NEIPSRADILMHKLN LFPSSAPE+RSLSPP
Sbjct: 687  FEVSKVVLRAPGDSVMEWFKKPIVQQFLINEIPSRADILMHKLNTLFPSSAPEIRSLSPP 746

Query: 1443 KPLIAGRSL 1469
            KPLI+G+++
Sbjct: 747  KPLISGKAI 755



 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
 Frame = +3

Query: 6   AVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDE 185
           A +++L+      G    + +VY  M+  G     + +  +I S  K+G+L+ A +++ E
Sbjct: 198 ATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQE 257

Query: 186 MKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQ 365
           MK+   RP++ ++  +V+S  K+G+L+ +M V+ +M+  G  P+ + Y  L+E     G+
Sbjct: 258 MKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGK 317

Query: 366 VDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGY-SVDVCASD 542
           ++ A+++++ M  AG RP    YT                    +M+  G+       S 
Sbjct: 318 LETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSC 377

Query: 543 VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYE-SAKPLLE 704
           +L ++     VD A++    M ++GLR        L        L + +AK LLE
Sbjct: 378 LLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLE 432



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 1/268 (0%)
 Frame = +3

Query: 21  LVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDEMKKAG 200
           +V  L KA +L+ +   + ++Q  G K     + SLI  F+  G    A  +++ M+ AG
Sbjct: 168 VVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAG 227

Query: 201 FRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAM 380
              +   Y +++ S AKSG+L+ A  +F +M++    P+   ++ L++     G++D +M
Sbjct: 228 CLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSM 287

Query: 381 KLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV-CASDVLMVY 557
           K+Y  M   GLRP  + Y S                   EMK  G+  +    + V+  +
Sbjct: 288 KVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESH 347

Query: 558 IKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSAAKVDL 737
            K   ++ A+     M+ +G          L E    +G  +SA  L  +  N+  +  L
Sbjct: 348 AKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGL 407

Query: 738 ILYTSILAHLVRCQEEDNEKHLMLILSA 821
             YT++L  L   +  D    ++L + A
Sbjct: 408 STYTALLTLLANKKLVDVAAKVLLEMKA 435


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  847 bits (2187), Expect = 0.0
 Identities = 422/489 (86%), Positives = 451/489 (92%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            + VF++LVDS+GKAGRLDTSMKVYMEMQGFGL+PSATM+VSLI+SFVKAGKLETALRIWD
Sbjct: 354  FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWD 413

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
            EMKKAGFRPNYGLYTM+VESHAKSGKLE AMSVFSDMEKAGFLPTPSTYSCLLEMH+A+G
Sbjct: 414  EMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASG 473

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDVCASD 542
            QVD AMKLYNSMTNAGLRPGLSTYT+                   EMKAMG+SVDV ASD
Sbjct: 474  QVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSASD 533

Query: 543  VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSA 722
            VLMVYIKD SVDLALRWLRFM SSG+RTNNFI+RQLFESCMKNGLYESAKPLLETYVNSA
Sbjct: 534  VLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSA 593

Query: 723  AKVDLILYTSILAHLVRCQEEDNEKHLMLILSATRHKAHTFMCGLFTGPEQRKQPVLSFV 902
            AKVDLILYTSILAHLVRCQEE NE+HLMLILSAT+HKAHTFMCGLFTGPEQRKQPVLSFV
Sbjct: 594  AKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPVLSFV 653

Query: 903  REFFQGIDYEMEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIA 1082
            REFFQ +DYE+EEGAA+YF          MGQINRARCVWKVAYENKLFPKAIVFDQHIA
Sbjct: 654  REFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIA 713

Query: 1083 WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP 1262
            WSLDVRNLSVGAAL+AVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIV+AQML+SVESP
Sbjct: 714  WSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVESP 773

Query: 1263 FEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSRADILMHKLNILFPSSAPELRSLSPP 1442
            FEVSKVVLRAPGDSV+EWFKKPIVQQFL+NEIPSRADILMHKLN LFPSSAPE+RSLSPP
Sbjct: 774  FEVSKVVLRAPGDSVMEWFKKPIVQQFLINEIPSRADILMHKLNTLFPSSAPEIRSLSPP 833

Query: 1443 KPLIAGRSL 1469
            KPLI+G+++
Sbjct: 834  KPLISGKAM 842



 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
 Frame = +3

Query: 6   AVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDE 185
           A +++L+      G    + +VY  M+  G     + +  +I S  K+G+L+ A +++ E
Sbjct: 285 ATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQE 344

Query: 186 MKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQ 365
           MK+   RP++ ++  +V+S  K+G+L+ +M V+ +M+  G  P+ + Y  L+E     G+
Sbjct: 345 MKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGK 404

Query: 366 VDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGY-SVDVCASD 542
           ++ A+++++ M  AG RP    YT                    +M+  G+       S 
Sbjct: 405 LETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSC 464

Query: 543 VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYE-SAKPLLE 704
           +L ++     VD A++    M ++GLR        L        L + +AK LLE
Sbjct: 465 LLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLE 519



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 1/268 (0%)
 Frame = +3

Query: 21   LVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDEMKKAG 200
            +V  L KA +L+ +   + ++Q  G K     + SLI  F+  G    A  +++ M+ AG
Sbjct: 255  VVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAG 314

Query: 201  FRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAM 380
               +   Y +++ S AKSG+L+ A  +F +M++    P+   ++ L++     G++D +M
Sbjct: 315  CLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSM 374

Query: 381  KLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV-CASDVLMVY 557
            K+Y  M   GLRP  + Y S                   EMK  G+  +    + V+  +
Sbjct: 375  KVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESH 434

Query: 558  IKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSAAKVDL 737
             K   ++ A+     M+ +G          L E    +G  +SA  L  +  N+  +  L
Sbjct: 435  AKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGL 494

Query: 738  ILYTSILAHLVRCQEEDNEKHLMLILSA 821
              YT++L  L   +  D    ++L + A
Sbjct: 495  STYTALLTLLANKKLVDVAAKVLLEMKA 522


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  819 bits (2116), Expect = 0.0
 Identities = 407/487 (83%), Positives = 443/487 (90%)
 Frame = +3

Query: 9    VFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDEM 188
            +FS+LVDS+GKAGRL+TSMKVYMEMQG GL+PSA M+VSLI+S+ KAGKL+ ALR+WDEM
Sbjct: 299  IFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEM 358

Query: 189  KKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQV 368
            K AGFRPN+GLYT+I+ESHAKSGKL+IAMS+F DMEKAGFLPTPSTYS LLEMHAA+GQV
Sbjct: 359  KIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQV 418

Query: 369  DFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDVCASDVL 548
            D AMKLYNSMTNAGLRPGLSTYT+                   EMKAMG+SVDV ASDVL
Sbjct: 419  DAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMGFSVDVSASDVL 478

Query: 549  MVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSAAK 728
            MVYIKD SVDL+LRWLRFM SSG+RTNNFI+RQLFESCMKNGLYESAKPLLETYVNSAAK
Sbjct: 479  MVYIKDGSVDLSLRWLRFMSSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 538

Query: 729  VDLILYTSILAHLVRCQEEDNEKHLMLILSATRHKAHTFMCGLFTGPEQRKQPVLSFVRE 908
            VDLILYTSILA+LVRCQEE NE+HLM ILSATRHKAH FMCGLFTGPEQRKQPVLSFVRE
Sbjct: 539  VDLILYTSILAYLVRCQEEQNERHLMAILSATRHKAHAFMCGLFTGPEQRKQPVLSFVRE 598

Query: 909  FFQGIDYEMEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWS 1088
            FFQGIDYE+EEGAAKYF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWS
Sbjct: 599  FFQGIDYELEEGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWS 658

Query: 1089 LDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFE 1268
            LDVRNLSVGAAL+AVVHTLHRFRKRMLYYGV+PRRIKLVTGPTL+IV+AQMLSSVESPFE
Sbjct: 659  LDVRNLSVGAALVAVVHTLHRFRKRMLYYGVIPRRIKLVTGPTLRIVVAQMLSSVESPFE 718

Query: 1269 VSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSRADILMHKLNILFPSSAPELRSLSPPKP 1448
            VSKVVLRAPGDSV+EWFKKPIVQQFLLNEIPSRADILMH+LNILFP+SAPE+RSLSPPKP
Sbjct: 719  VSKVVLRAPGDSVMEWFKKPIVQQFLLNEIPSRADILMHRLNILFPTSAPEIRSLSPPKP 778

Query: 1449 LIAGRSL 1469
            LI+ +++
Sbjct: 779  LISAKAV 785



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 64/274 (23%), Positives = 123/274 (44%), Gaps = 1/274 (0%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            ++ ++ ++  L KA +L+ S   + ++Q  G K     +  L+  F+  G    A  I++
Sbjct: 192  FSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYE 251

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
             M+ A    +   Y +++ S AKSG+L+ A  +F +M++  F P+   +S L++     G
Sbjct: 252  TMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAG 311

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV-CAS 539
            +++ +MK+Y  M   GLRP    Y S                   EMK  G+  +    +
Sbjct: 312  RLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYT 371

Query: 540  DVLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNS 719
             ++  + K   +D+A+   R M+ +G          L E    +G  ++A  L  +  N+
Sbjct: 372  LIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNA 431

Query: 720  AAKVDLILYTSILAHLVRCQEEDNEKHLMLILSA 821
              +  L  YT++L  L   +  D    ++L + A
Sbjct: 432  GLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKA 465



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 34/138 (24%), Positives = 80/138 (57%)
 Frame = +3

Query: 3   YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
           + +++ +++S  K+G+LD +M ++ +M+  G  P+ + + SL++    +G+++ A+++++
Sbjct: 367 FGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYN 426

Query: 183 EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
            M  AG RP    YT ++   A    +++A  +  +M+  GF    S  S +L ++   G
Sbjct: 427 SMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDG 485

Query: 363 QVDFAMKLYNSMTNAGLR 416
            VD +++    M+++G+R
Sbjct: 486 SVDLSLRWLRFMSSSGIR 503


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
            gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 832

 Score =  817 bits (2111), Expect = 0.0
 Identities = 401/488 (82%), Positives = 443/488 (90%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            ++VFS+LVDS+GKAGRLDTSMKVYMEMQGFG +PSATMFVSLIDS+ KAGKL+TALR+WD
Sbjct: 344  FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 403

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
            EMKK+GFRPN+GLYTMI+ESHAKSGKLE+AMSVF DMEKAGFLPTPSTYSCLLEMHA +G
Sbjct: 404  EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSG 463

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDVCASD 542
            QVD AMK+YNSMTNAGLRPGLS+Y S                   EMKAMGYSVDVCASD
Sbjct: 464  QVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASD 523

Query: 543  VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSA 722
            VLM+YIKD SVDLAL+WLRFM SSG++TNNFI+RQLFESCMKNGLY+SA+PLLET V+SA
Sbjct: 524  VLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSA 583

Query: 723  AKVDLILYTSILAHLVRCQEEDNEKHLMLILSATRHKAHTFMCGLFTGPEQRKQPVLSFV 902
             KVDL+LYTSILAHLVRCQ+ED E+ LM ILSAT+HKAH FMCGLFTGPEQRKQPVL+FV
Sbjct: 584  GKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFV 643

Query: 903  REFFQGIDYEMEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIA 1082
            REF+QGIDYE+EEGAA+YF          MGQINRARCVWKVAYENKLFPKAIVFDQHIA
Sbjct: 644  REFYQGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIA 703

Query: 1083 WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP 1262
            WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQ+LSSVESP
Sbjct: 704  WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQVLSSVESP 763

Query: 1263 FEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSRADILMHKLNILFPSSAPELRSLSPP 1442
            FEVSKVVLRAPGD V+EWFKKPIVQQFLLNEIPSR+DILMHK+N++FPSSAPELRS+SPP
Sbjct: 764  FEVSKVVLRAPGDLVMEWFKKPIVQQFLLNEIPSRSDILMHKMNVMFPSSAPELRSMSPP 823

Query: 1443 KPLIAGRS 1466
            KPL++ ++
Sbjct: 824  KPLMSSKA 831



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 45/189 (23%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = +3

Query: 60  SMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDEMKKAGFRPNYGLYTMIVE 239
           + ++Y  M+        + +  +I S  K+G+L+ A +++ +MK+   RP++ +++ +V+
Sbjct: 293 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 352

Query: 240 SHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRP 419
           S  K+G+L+ +M V+ +M+  G  P+ + +  L++ +A  G++D A++L++ M  +G RP
Sbjct: 353 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 412

Query: 420 GLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGY-SVDVCASDVLMVYIKDVSVDLALRWL 596
               YT                    +M+  G+       S +L ++     VD A++  
Sbjct: 413 NFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 472

Query: 597 RFMDSSGLR 623
             M ++GLR
Sbjct: 473 NSMTNAGLR 481



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 1/274 (0%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            +  ++ ++  L KA +L+ +   + + Q  G K     + +L+  F+  G    A  I++
Sbjct: 239  FGAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYE 298

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
             M+K     +   Y +I+ S AKSG+L+ A  +F  M++    P+ S +S L++     G
Sbjct: 299  SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 358

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV-CAS 539
            ++D +MK+Y  M   G RP  + + S                   EMK  G+  +    +
Sbjct: 359  RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 418

Query: 540  DVLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNS 719
             ++  + K   +++A+   + M+ +G          L E    +G  +SA  +  +  N+
Sbjct: 419  MIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 478

Query: 720  AAKVDLILYTSILAHLVRCQEEDNEKHLMLILSA 821
              +  L  Y S+L  L   +  D    ++L + A
Sbjct: 479  GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 512


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
            DEFECTIVE 2217; Flags: Precursor
            gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
            thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  816 bits (2108), Expect = 0.0
 Identities = 400/488 (81%), Positives = 443/488 (90%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            ++VFS+LVDS+GKAGRLDTSMKVYMEMQGFG +PSATMFVSLIDS+ KAGKL+TALR+WD
Sbjct: 348  FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 407

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
            EMKK+GFRPN+GLYTMI+ESHAKSGKLE+AM+VF DMEKAGFLPTPSTYSCLLEMHA +G
Sbjct: 408  EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG 467

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDVCASD 542
            QVD AMK+YNSMTNAGLRPGLS+Y S                   EMKAMGYSVDVCASD
Sbjct: 468  QVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASD 527

Query: 543  VLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNSA 722
            VLM+YIKD SVDLAL+WLRFM SSG++TNNFI+RQLFESCMKNGLY+SA+PLLET V+SA
Sbjct: 528  VLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSA 587

Query: 723  AKVDLILYTSILAHLVRCQEEDNEKHLMLILSATRHKAHTFMCGLFTGPEQRKQPVLSFV 902
             KVDL+LYTSILAHLVRCQ+ED E+ LM ILSAT+HKAH FMCGLFTGPEQRKQPVL+FV
Sbjct: 588  GKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFV 647

Query: 903  REFFQGIDYEMEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIA 1082
            REF+QGIDYE+EEGAA+YF          MGQINRARCVWKVAYENKLFPKAIVFDQHIA
Sbjct: 648  REFYQGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIA 707

Query: 1083 WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP 1262
            WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP
Sbjct: 708  WSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESP 767

Query: 1263 FEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSRADILMHKLNILFPSSAPELRSLSPP 1442
            FEVSKVVLRAPG+ V+EWFKKPIVQQFLLNEIPSR+DILMHK+N++FPSSAPELRS+SPP
Sbjct: 768  FEVSKVVLRAPGELVMEWFKKPIVQQFLLNEIPSRSDILMHKMNVMFPSSAPELRSMSPP 827

Query: 1443 KPLIAGRS 1466
            KPL++ ++
Sbjct: 828  KPLMSSKA 835



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 45/189 (23%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = +3

Query: 60  SMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWDEMKKAGFRPNYGLYTMIVE 239
           + ++Y  M+        + +  +I S  K+G+L+ A +++ +MK+   RP++ +++ +V+
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356

Query: 240 SHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRP 419
           S  K+G+L+ +M V+ +M+  G  P+ + +  L++ +A  G++D A++L++ M  +G RP
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416

Query: 420 GLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGY-SVDVCASDVLMVYIKDVSVDLALRWL 596
               YT                    +M+  G+       S +L ++     VD A++  
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476

Query: 597 RFMDSSGLR 623
             M ++GLR
Sbjct: 477 NSMTNAGLR 485



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 1/274 (0%)
 Frame = +3

Query: 3    YAVFSALVDSLGKAGRLDTSMKVYMEMQGFGLKPSATMFVSLIDSFVKAGKLETALRIWD 182
            +  ++ ++  L KA +L+ +   + + Q  G K     + +L+  F+  G    A  I++
Sbjct: 243  FNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYE 302

Query: 183  EMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATG 362
             M+K     +   Y +I+ S AKSG+L+ A  +F  M++    P+ S +S L++     G
Sbjct: 303  SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362

Query: 363  QVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV-CAS 539
            ++D +MK+Y  M   G RP  + + S                   EMK  G+  +    +
Sbjct: 363  RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422

Query: 540  DVLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIVRQLFESCMKNGLYESAKPLLETYVNS 719
             ++  + K   +++A+   + M+ +G          L E    +G  +SA  +  +  N+
Sbjct: 423  MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482

Query: 720  AAKVDLILYTSILAHLVRCQEEDNEKHLMLILSA 821
              +  L  Y S+L  L   +  D    ++L + A
Sbjct: 483  GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 1/196 (0%)
 Frame = +3

Query: 105 SATMFVSLIDSFVKAGKLETALRIWDEMKKAGFRPNYGLYTMIVESHAKSGKLEIAMSVF 284
           S   +  +I    KA KLE A   + + +++G + +   Y  ++      G    A  ++
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301

Query: 285 SDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSXXXXXXXX 464
             MEK   L   STY  ++   A +G++D A KL+  M    LRP  S ++S        
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361

Query: 465 XXXXXXXXXXXEMKAMGYSVDVCA-SDVLMVYIKDVSVDLALRWLRFMDSSGLRTNNFIV 641
                      EM+  G+         ++  Y K   +D ALR    M  SG R N  + 
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421

Query: 642 RQLFESCMKNGLYESA 689
             + ES  K+G  E A
Sbjct: 422 TMIIESHAKSGKLEVA 437