BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032986
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      98   8e-19
gb|ABA95990.1| retrotransposon protein, putative, unclassified [...    90   2e-16
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                90   2e-16
gb|AAM44870.1|AC098694_9 Putative gag-pol precursor [Oryza sativ...    89   3e-16
gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subc...    89   4e-16

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/101 (47%), Positives = 71/101 (70%)
 Frame = -3

Query: 316 F*IEYVPRTVIKGQALADFVVECTFPEDPILKASPDHSHSDPHITWELFVDGSATSERSG 137
           F I+Y PR  IKGQALADF+ ECT+ E+P           +P + WE++ DGS+T+  SG
Sbjct: 704 FGIQYKPRPSIKGQALADFLAECTYQEEP-----------NPGV-WEVYTDGSSTTNSSG 751

Query: 136 AGIILSTPDGFQIKQALRFAFKATNNQSEYEALLGGLRLAQ 14
           AGI++ +P+G + + AL+F F A+NN+SEYEA++ G+ LA+
Sbjct: 752 AGILIISPNGDEFEYALKFTFSASNNESEYEAVITGVELAR 792


>gb|ABA95990.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 618

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/106 (46%), Positives = 65/106 (61%)
 Frame = -3

Query: 319 QF*IEYVPRTVIKGQALADFVVECTFPEDPILKASPDHSHSDPHITWELFVDGSATSERS 140
           QF + +VPRT IK Q LADFV + T PE+ +       S +D   TW +  DG+  S+ +
Sbjct: 222 QFDVHFVPRTAIKSQVLADFVADWTMPENRL------DSQTDNE-TWTMAFDGALNSQGA 274

Query: 139 GAGIILSTPDGFQIKQALRFAFKATNNQSEYEALLGGLRLAQHLQV 2
           GAG IL++P G Q K A+   F+ATNN +EYE LL G+R A  L V
Sbjct: 275 GAGFILTSPSGDQFKHAIHLNFRATNNIAEYEGLLAGIRAAAALGV 320


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/106 (46%), Positives = 64/106 (60%)
 Frame = -3

Query: 319  QF*IEYVPRTVIKGQALADFVVECTFPEDPILKASPDHSHSDPHITWELFVDGSATSERS 140
            +F IEY PR  IK QALADF  E T          P  +   P   W L+VDGS+ S  S
Sbjct: 1294 EFHIEYQPRGAIKSQALADFTAELT----------PYLTERTPR--WTLYVDGSSNSRSS 1341

Query: 139  GAGIILSTPDGFQIKQALRFAFKATNNQSEYEALLGGLRLAQHLQV 2
            GAG++L  P    ++QA++F FK +NNQ+EYEA++ GL LA  L+V
Sbjct: 1342 GAGVVLEGPGEIVVEQAMKFEFKTSNNQAEYEAIIAGLHLAIELEV 1387


>gb|AAM44870.1|AC098694_9 Putative gag-pol precursor [Oryza sativa Japonica Group]
           gi|31429859|gb|AAP51854.1| transposon protein, putative,
           unclassified [Oryza sativa Japonica Group]
          Length = 534

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -3

Query: 319 QF*IEYVPRTVIKGQALADFVVECTFPEDPILKASPDHSHSDPHI---TWELFVDGSATS 149
           QF I ++PRT+IK Q LADFVV+ T P++           SD  I   TW +  DG+  S
Sbjct: 207 QFDIYFMPRTIIKSQVLADFVVDWTMPDN----------RSDNQIDNETWTMAYDGALNS 256

Query: 148 ERSGAGIILSTPDGFQIKQALRFAFKATNNQSEYEALLGGLRLAQHLQV 2
           + +G G IL++P G Q K A+   F+ATNN +EYE LL G+R A  L+V
Sbjct: 257 QGAGTGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALRV 305


>gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1129

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -3

Query: 319 QF*IEYVPRTVIKGQALADFVVECTFPEDPILKASPDHSHSDPHI---TWELFVDGSATS 149
           QF I +VPRT IK Q LADFV + T P++           SD  I   TW +  DG+  S
Sbjct: 588 QFDIHFVPRTAIKSQVLADFVADWTIPDN----------RSDNQIDNETWTMAFDGALNS 637

Query: 148 ERSGAGIILSTPDGFQIKQALRFAFKATNNQSEYEALLGGLRLAQHLQV 2
           + +GAG IL++P G Q K A+   F+ATNN +EY+ALL G+R+A  L V
Sbjct: 638 QGAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYQALLVGIRVAAALGV 686