BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032981
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
 Frame = -3

Query: 443 HALQVSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLN 264
           HAL++S WMSDKRY  L+  D+A++L+L++K  GI+QA  YF N+ +++K LE Y +LLN
Sbjct: 99  HALEISMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLN 158

Query: 263 CYXXXXXXXXXXXVLQKMKDLGMPIHILTYNNMLNLYCKTGNLGKLKSVVHEMEEKAVKC 84
           CY           V+Q M+DLG     LTYN MLNL+ +TGN  KL++++ EMEE  +  
Sbjct: 159 CYAYAKSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAY 218

Query: 83  DKYTYSIML-AFSANCNTESIDVIVQKM 3
           D++T  I L A++A C+ + ++ I+ +M
Sbjct: 219 DRFTLGIQLSAYAAICDIQRMEKIMSRM 246


>ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|222872228|gb|EEF09359.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/148 (43%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
 Frame = -3

Query: 443 HALQVSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLN 264
           HALQ+S+WMSD+R   LS  D+AV+L+LI+K  G++QAV YF+++ E ++GLE YG+LLN
Sbjct: 83  HALQISQWMSDQRGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLN 142

Query: 263 CYXXXXXXXXXXXVLQKMKDLGMPIHILTYNNMLNLYCKTGNLGKLKSVVHEMEEKAVKC 84
           CY            ++KM+++G   ++L+YN MLNLY + G   K++ ++ EME+  +  
Sbjct: 143 CYAHYKHLEEAEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICF 202

Query: 83  DKYTYSIML-AFSANCNTESIDVIVQKM 3
              TY I+L A+ A  N E I  I+ KM
Sbjct: 203 SNITYKILLNAYVATSNIEEIKKILMKM 230


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/148 (43%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
 Frame = -3

Query: 443 HALQVSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLN 264
           HAL++S WM+DKRYL L+   +AV+L+LI+K  GI+Q   YF+NI  ++KGLE+YG+LLN
Sbjct: 96  HALEISMWMTDKRYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLN 155

Query: 263 CYXXXXXXXXXXXVLQKMKDLGMPIHILTYNNMLNLYCKTGNLGKLKSVVHEMEEKAVKC 84
           CY           V+Q+M++LG     L +  MLNLY KTGN  KL  ++ EMEE  +  
Sbjct: 156 CYAYVKSVEKAEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISF 215

Query: 83  DKYTYSIML-AFSANCNTESIDVIVQKM 3
           DK+ Y I L +++A  ++E ++  ++++
Sbjct: 216 DKFAYCIRLSSYAAASDSEGLEKTLKRI 243


>ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|222872230|gb|EEF09361.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/148 (43%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
 Frame = -3

Query: 443 HALQVSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLN 264
           HALQ+S+WMSD+R  + S  D AV+L+LI+K  G++QA  Y+++I + ++G + YG+LLN
Sbjct: 54  HALQISQWMSDERGSEQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLN 113

Query: 263 CYXXXXXXXXXXXVLQKMKDLGMPIHILTYNNMLNLYCKTGNLGKLKSVVHEMEEKAVKC 84
           CY            +QKM++LG+ +  L+YN ML+LY   G   KL+++V EMEEK V  
Sbjct: 114 CYAHKRRLEKAEATMQKMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNS 172

Query: 83  DKYTYSIML-AFSANCNTESIDVIVQKM 3
           D YT++I L A+ A  N E ++ ++ KM
Sbjct: 173 DIYTFNIRLHAYVATSNIEEMEKLLMKM 200


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/144 (42%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431 VSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLNCYXX 252
           +S+WMSDKRY+ L   D+A+++NLI K  G++Q   YF+NI + +K  + Y +LLNCY  
Sbjct: 102 ISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYAL 161

Query: 251 XXXXXXXXXVLQKMKDLGMPIHILTYNNMLNLYCKTGNLGKLKSVVHEMEEKAVKCDKYT 72
                    ++Q+++DLG     L YN ++N+Y + GN  KL  ++HEMEEK + CDK+T
Sbjct: 162 EKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFT 221

Query: 71  YSIML-AFSANCNTESIDVIVQKM 3
            +I L A++A  N   ID IV +M
Sbjct: 222 LAIRLSAYAAASNIVGIDNIVTRM 245



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/155 (26%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
 Frame = -3

Query: 434 QVSRWMSDKRYLQLSRADMAVQLNLIAKAEGIDQAVIYFSNISEQMKGLEAYGSLLNCYX 255
           ++S+WMSDKRY+ L   D+A+++NLI K  G++Q   YF+NI + +K  + Y +LLNCY 
Sbjct: 22  KISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYA 81

Query: 254 XXXXXXXXXXVLQKMKDLG-----------MPIHILTYNNMLNLYCKTGNLGKLKSVVHE 108
                     ++Q+++DLG           +P+        +NL  K   L ++++  + 
Sbjct: 82  LEKSVDKAEAIMQRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNN 141

Query: 107 MEEKAVKCDKYTYSIMLAFSANCNTESIDVIVQKM 3
           +  K +K  +   +++  ++   + +  + I+Q++
Sbjct: 142 I-HKNLKTYQVYIALLNCYALEKSVDKAEAIMQRL 175