BLASTX nr result

ID: Bupleurum21_contig00032980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032980
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
emb|CBI23306.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinif...    99   4e-19
ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]      98   6e-19
ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]      98   8e-19

>ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/72 (72%), Positives = 63/72 (87%)
 Frame = +3

Query: 243 KDIVLAILVSSYFKIFLIATMIWEFPSSVLYIIDIVALSSNTVALKVITESAMSKCLAVC 422
           KDI+LAILVSSYFKIFLIATM+WEFPSSV++IID+  LSSNTVALKVIT+SAM++C+A C
Sbjct: 152 KDILLAILVSSYFKIFLIATMVWEFPSSVIFIIDLFVLSSNTVALKVITDSAMNRCIAAC 211

Query: 423 LSAYVVKFLVME 458
             A  +K LV +
Sbjct: 212 FCAQALKLLVTQ 223


>emb|CBI23306.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/76 (61%), Positives = 61/76 (80%)
 Frame = +3

Query: 240 FKDIVLAILVSSYFKIFLIATMIWEFPSSVLYIIDIVALSSNTVALKVITESAMSKCLAV 419
           +K+++LAIL+SSYFKIFLIA M+WE PSSV++IID+  LSSNTVALKVIT S MS+C   
Sbjct: 23  YKNLLLAILISSYFKIFLIAMMVWELPSSVIFIIDVFVLSSNTVALKVITGSGMSRCTET 82

Query: 420 CLSAYVVKFLVMELLN 467
           C  A+ VK  V +L++
Sbjct: 83  CFVAHAVKLFVSQLIS 98


>ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinifera]
           gi|296089029|emb|CBI38732.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = +3

Query: 240 FKDIVLAILVSSYFKIFLIATMIWEFPSSVLYIIDIVALSSNTVALKVITESAMSKCLAV 419
           +K+++LAIL+SSYFKIFLIA M+WE PSSV++IID+  LSSNTVALKV+T S MS+C   
Sbjct: 151 YKNLLLAILISSYFKIFLIAMMVWELPSSVIFIIDVFVLSSNTVALKVVTGSGMSRCAET 210

Query: 420 CLSAYVVKFLVMEL 461
           C  A+ VK  V +L
Sbjct: 211 CFVAHAVKLFVSQL 224


>ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 247

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/81 (54%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
 Frame = +3

Query: 246 DIVLAILVSSYFKIFLIATMIWEFPSSVLYIIDIVALSSNTVALKVITESAMSKCLAVCL 425
           D++LA+++SSYFKIF IA M+WEFPSSV++II++  LSSN   LKV+T+S MS+C+  C 
Sbjct: 153 DLLLALMISSYFKIFFIAMMVWEFPSSVIFIIELFCLSSNAATLKVMTDSTMSRCVWTCF 212

Query: 426 SAYVVKFL---VMELLNGGML 479
           SAY +KF+   ++ELL G ++
Sbjct: 213 SAYAIKFIITWILELLPGQLM 233


>ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 250

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/84 (54%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
 Frame = +3

Query: 246 DIVLAILVSSYFKIFLIATMIWEFPSSVLYIIDIVALSSNTVALKVITESAMSKCLAVCL 425
           D++L +++SSYFKIFLIA M+W+FPSSV++II++  LSSN  ALKV+TES M +C+  C 
Sbjct: 153 DLLLTLMISSYFKIFLIAMMVWDFPSSVIFIIELFCLSSNAAALKVMTESTMRRCVWTCF 212

Query: 426 SAYVVKFLV---MELLNGGMLIFG 488
           SAY +KF+V   +EL+  G L+ G
Sbjct: 213 SAYAIKFIVTRILELILLGQLMQG 236


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