BLASTX nr result

ID: Bupleurum21_contig00032974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032974
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20785.3| unnamed protein product [Vitis vinifera]              229   1e-58
ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/...   229   1e-58
emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]   229   1e-58
ref|XP_002438796.1| hypothetical protein SORBIDRAFT_10g026420 [S...   226   2e-57
ref|XP_003603523.1| Cryptochrome DASH [Medicago truncatula] gi|3...   224   4e-57

>emb|CBI20785.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  229 bits (585), Expect = 1e-58
 Identities = 102/111 (91%), Positives = 107/111 (96%)
 Frame = +3

Query: 3   DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 182
           DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA
Sbjct: 439 DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 498

Query: 183 GVGNDPREDRYFSIPKQAKNYDPEGDYVAYWLPELRSLPKDKRNFPANSYM 335
           GVGNDPREDRYFSIPKQAK YDPEG+YVA+WLPEL++LP DKRNFP  SY+
Sbjct: 499 GVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRNFPGKSYI 549


>ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 549

 Score =  229 bits (585), Expect = 1e-58
 Identities = 102/111 (91%), Positives = 107/111 (96%)
 Frame = +3

Query: 3   DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 182
           DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA
Sbjct: 402 DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 461

Query: 183 GVGNDPREDRYFSIPKQAKNYDPEGDYVAYWLPELRSLPKDKRNFPANSYM 335
           GVGNDPREDRYFSIPKQAK YDPEG+YVA+WLPEL++LP DKRNFP  SY+
Sbjct: 462 GVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRNFPGKSYI 512


>emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]
          Length = 584

 Score =  229 bits (585), Expect = 1e-58
 Identities = 102/111 (91%), Positives = 107/111 (96%)
 Frame = +3

Query: 3   DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 182
           DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA
Sbjct: 437 DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 496

Query: 183 GVGNDPREDRYFSIPKQAKNYDPEGDYVAYWLPELRSLPKDKRNFPANSYM 335
           GVGNDPREDRYFSIPKQAK YDPEG+YVA+WLPEL++LP DKRNFP  SY+
Sbjct: 497 GVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRNFPGKSYI 547


>ref|XP_002438796.1| hypothetical protein SORBIDRAFT_10g026420 [Sorghum bicolor]
           gi|241917019|gb|EER90163.1| hypothetical protein
           SORBIDRAFT_10g026420 [Sorghum bicolor]
          Length = 577

 Score =  226 bits (575), Expect = 2e-57
 Identities = 101/112 (90%), Positives = 108/112 (96%)
 Frame = +3

Query: 3   DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 182
           DANM+ELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDP SNYGNWTYGA
Sbjct: 433 DANMRELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGA 492

Query: 183 GVGNDPREDRYFSIPKQAKNYDPEGDYVAYWLPELRSLPKDKRNFPANSYMK 338
           GVGNDPREDRYFSIPKQAK+YDPEG+YVAYWLPELRSL K++RNFP  SY++
Sbjct: 493 GVGNDPREDRYFSIPKQAKSYDPEGEYVAYWLPELRSLAKERRNFPGASYIR 544


>ref|XP_003603523.1| Cryptochrome DASH [Medicago truncatula] gi|355492571|gb|AES73774.1|
           Cryptochrome DASH [Medicago truncatula]
          Length = 366

 Score =  224 bits (572), Expect = 4e-57
 Identities = 98/112 (87%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   DANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 182
           DANMKELS TGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYG+
Sbjct: 218 DANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGS 277

Query: 183 GVGNDPREDRYFSIPKQAKNYDPEGDYVAYWLPELRSLPKDKRNFPANSYMK 338
           GVGNDPREDRYFSIPKQA+ YDPEG+YVAYWLP+LR++ K+KRNFP N Y++
Sbjct: 278 GVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRAISKEKRNFPGNLYIR 329


Top