BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032954
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi...   342   1e-91
ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi...   338   1e-90
ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containi...   327   4e-87
ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm...   322   1e-85
ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containi...   317   2e-84

>ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed
           protein product [Vitis vinifera]
          Length = 252

 Score =  342 bits (876), Expect = 1e-91
 Identities = 171/233 (73%), Positives = 191/233 (81%)
 Frame = -1

Query: 929 LIKVPNITKTVLSQTPLQFVPNKTLVFSDYLYRNYHDGRPRGSLWRGKKLIGKEAIFVIL 750
           LIK P    T      L+   NK L    +  ++YHDGRPRG LWRGKKLIGKEA+FVIL
Sbjct: 22  LIKSPIKESTKFQFPVLEVASNKPL----FGLKHYHDGRPRGPLWRGKKLIGKEALFVIL 77

Query: 749 GLKRLKDDEEKLNKFIKTHVLRLLKMDMVAVLNELERQEEVALAVKMFWVIKKQDWYKPD 570
           GLKR KDDEEKL KFIK+HVLRLLKMDM+AVL ELERQEEV LAV++F V +KQDWYKPD
Sbjct: 78  GLKRFKDDEEKLRKFIKSHVLRLLKMDMIAVLTELERQEEVTLAVEVFRVFQKQDWYKPD 137

Query: 569 KYLYKDLIIALAKSKKMDEAMQLWDSMRKEDLYPDFQTYTEIIRGFLRNGSPADAMNIYE 390
            YLYKDLIIALAK KKMD AMQLW+SMRKEDL+PD+QTYTE+IRGFLR+GSPADAMNIYE
Sbjct: 138 VYLYKDLIIALAKCKKMDNAMQLWESMRKEDLFPDYQTYTEVIRGFLRHGSPADAMNIYE 197

Query: 389 DMKQSPDPPEELPFRIXXXXXXXXXXLRNKVKQDFEEIFPDQRIFDPPEEIFG 231
           DMK+SPDPPEELPFRI          LRN+VKQDFEEIFPD+ ++DPPEEIFG
Sbjct: 198 DMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEIFPDRHVYDPPEEIFG 250


>ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           isoform 1 [Vitis vinifera]
           gi|359478900|ref|XP_003632183.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46870
           isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3|
           unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  338 bits (868), Expect = 1e-90
 Identities = 172/234 (73%), Positives = 192/234 (82%)
 Frame = -1

Query: 932 DLIKVPNITKTVLSQTPLQFVPNKTLVFSDYLYRNYHDGRPRGSLWRGKKLIGKEAIFVI 753
           +LIK P    T      L+    K L+ S    + YHDGRPRG LWRGKKLIGKEA+FVI
Sbjct: 21  NLIKAPIKESTRFQFPVLEVGSYKPLLGS----KLYHDGRPRGPLWRGKKLIGKEALFVI 76

Query: 752 LGLKRLKDDEEKLNKFIKTHVLRLLKMDMVAVLNELERQEEVALAVKMFWVIKKQDWYKP 573
           LGLKR KDDEE L KFIK+HVLRLLKMDMVAVL ELERQEEV+LAV++F VI+KQDWYKP
Sbjct: 77  LGLKRFKDDEENLRKFIKSHVLRLLKMDMVAVLTELERQEEVSLAVEVFRVIRKQDWYKP 136

Query: 572 DKYLYKDLIIALAKSKKMDEAMQLWDSMRKEDLYPDFQTYTEIIRGFLRNGSPADAMNIY 393
           D YLYKDLIIALAK KKMD+AMQLW+SMRKEDL+PD+QTYTE+IRGFLR GSPADAMNIY
Sbjct: 137 DVYLYKDLIIALAKCKKMDDAMQLWESMRKEDLFPDYQTYTEVIRGFLRYGSPADAMNIY 196

Query: 392 EDMKQSPDPPEELPFRIXXXXXXXXXXLRNKVKQDFEEIFPDQRIFDPPEEIFG 231
           EDMK+SPDPPEELPFRI          LRN+VKQDFEEIFPD+ ++DPPEEIFG
Sbjct: 197 EDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEIFPDRHVYDPPEEIFG 250


>ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Glycine max]
          Length = 255

 Score =  327 bits (837), Expect = 4e-87
 Identities = 159/225 (70%), Positives = 185/225 (82%), Gaps = 7/225 (3%)
 Frame = -1

Query: 884 PLQFVPNKTLVFSDY-------LYRNYHDGRPRGSLWRGKKLIGKEAIFVILGLKRLKDD 726
           P++ V + +L F ++        +R YHDGRPRG LW+GKKLIGKEA+FVI G KR  DD
Sbjct: 29  PIKDVSSTSLTFVEFNSFKTALCFRQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDD 88

Query: 725 EEKLNKFIKTHVLRLLKMDMVAVLNELERQEEVALAVKMFWVIKKQDWYKPDKYLYKDLI 546
           E+KL+KFIKTHVLRLLKMDM+AVL ELERQE+V+LA+ MF V++KQDWYKPD YLYKDLI
Sbjct: 89  EDKLHKFIKTHVLRLLKMDMIAVLTELERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLI 148

Query: 545 IALAKSKKMDEAMQLWDSMRKEDLYPDFQTYTEIIRGFLRNGSPADAMNIYEDMKQSPDP 366
           IALA++KKMDE +QLW+SMRKE+L+PD QTYTE+IRGFL  GSPADAMNIYEDMK SPDP
Sbjct: 149 IALARAKKMDEVLQLWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDP 208

Query: 365 PEELPFRIXXXXXXXXXXLRNKVKQDFEEIFPDQRIFDPPEEIFG 231
           PEELPFRI          LRNKVKQDFEEIFPD  I+DPP+EIFG
Sbjct: 209 PEELPFRILLKGLLPHPLLRNKVKQDFEEIFPDSSIYDPPQEIFG 253


>ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis]
           gi|223543626|gb|EEF45155.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  322 bits (824), Expect = 1e-85
 Identities = 159/246 (64%), Positives = 191/246 (77%), Gaps = 13/246 (5%)
 Frame = -1

Query: 929 LIKVPNITKTVLSQTPLQFVPNKTLVFSDYLY-------------RNYHDGRPRGSLWRG 789
           ++ + N+T   + QT  Q  PN   +F   +              R YHDGRPRG LWRG
Sbjct: 13  VVLLQNLTNKPIKQT--QLPPNSQALFDLNILNKHNHSHNSFSGLRQYHDGRPRGPLWRG 70

Query: 788 KKLIGKEAIFVILGLKRLKDDEEKLNKFIKTHVLRLLKMDMVAVLNELERQEEVALAVKM 609
           KKLIGKEA+FVILGLKR KD+EEKL+KFIKTHVLRLLKMDM+AVL ELERQEEV+LA K+
Sbjct: 71  KKLIGKEALFVILGLKRFKDEEEKLDKFIKTHVLRLLKMDMIAVLTELERQEEVSLATKV 130

Query: 608 FWVIKKQDWYKPDKYLYKDLIIALAKSKKMDEAMQLWDSMRKEDLYPDFQTYTEIIRGFL 429
           F +I+KQDWY PD YLYKDLIIAL +S KMD+AM+LW++MR E+L+PD Q YTE+IRGFL
Sbjct: 131 FQIIQKQDWYNPDVYLYKDLIIALTRSGKMDQAMKLWEAMRSENLFPDSQMYTELIRGFL 190

Query: 428 RNGSPADAMNIYEDMKQSPDPPEELPFRIXXXXXXXXXXLRNKVKQDFEEIFPDQRIFDP 249
           R+GSP DAMNIYEDMK+SPDPPEELPFRI          LRN+VKQD+EE+FP++ ++DP
Sbjct: 191 RDGSPGDAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDYEELFPEKHVYDP 250

Query: 248 PEEIFG 231
           PEEIFG
Sbjct: 251 PEEIFG 256


>ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449475090|ref|XP_004154371.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449508514|ref|XP_004163333.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 255

 Score =  317 bits (813), Expect = 2e-84
 Identities = 150/201 (74%), Positives = 176/201 (87%)
 Frame = -1

Query: 836 YRNYHDGRPRGSLWRGKKLIGKEAIFVILGLKRLKDDEEKLNKFIKTHVLRLLKMDMVAV 657
           +R YHDGRPRG LWR +K IGKEA+FVI GLKR K+DEEK  KF+K+HV RLLK+DMVAV
Sbjct: 52  FRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAV 111

Query: 656 LNELERQEEVALAVKMFWVIKKQDWYKPDKYLYKDLIIALAKSKKMDEAMQLWDSMRKED 477
           L ELERQEEVALAVK+F +I+KQDWYKPD Y+YKDLIIALA+SKKMD+AM+LW+SMR+E+
Sbjct: 112 LGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREEN 171

Query: 476 LYPDFQTYTEIIRGFLRNGSPADAMNIYEDMKQSPDPPEELPFRIXXXXXXXXXXLRNKV 297
           L+PD QTYTE+IRGFLR GSP+DAMN+YEDMK+SPDPP+ELPFRI          LRN+V
Sbjct: 172 LFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRV 231

Query: 296 KQDFEEIFPDQRIFDPPEEIF 234
           KQDFEE+FPDQ +FDPPEEIF
Sbjct: 232 KQDFEELFPDQHVFDPPEEIF 252