BLASTX nr result

ID: Bupleurum21_contig00032947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032947
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vi...   350   1e-94
ref|XP_002299813.1| predicted protein [Populus trichocarpa] gi|2...   344   7e-93
ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMA...   340   2e-91
ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   340   2e-91
ref|XP_003615633.1| DAMAGED DNA-BINDING protein [Medicago trunca...   336   2e-90

>ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera]
           gi|147833025|emb|CAN61895.1| hypothetical protein
           VITISV_028792 [Vitis vinifera]
           gi|297745903|emb|CBI15959.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  350 bits (899), Expect = 1e-94
 Identities = 161/206 (78%), Positives = 186/206 (90%)
 Frame = +3

Query: 24  LVSIEKKGQLGIWDFEKVYEKTVYGDIHGCILNHMKFNPRDDGTVYGASSDGTISSTDLE 203
           L+S +KKGQLG+WD+ KV+EKTVYG+IH CILN+M+F P +D T+Y ASSDGTIS TDLE
Sbjct: 187 LLSGDKKGQLGVWDYNKVHEKTVYGNIHHCILNNMRFKPTNDETIYAASSDGTISCTDLE 246

Query: 204 TGLTSSLMNLNPNGWQGPSTWRMLYGLDVNPEKGLVLVADNFGSLYFVDSRSNSQVGEAV 383
           TG++SSLMNLNPNGW+GPSTWRMLYG+D+N EKGLVLVADNFG LY VD+RSN+Q GEA+
Sbjct: 247 TGISSSLMNLNPNGWEGPSTWRMLYGMDINSEKGLVLVADNFGFLYLVDTRSNNQTGEAI 306

Query: 384 LIHKKGSKVTGLHCNPVQPDLLLSCGNDHFARLWDIRKLETGSFLYQLSHKRVVNSAYFS 563
           LIHKKGSKV GLHCNP+QP+LLLSCGNDHFAR+WD+R+LE GS L+ L H RVVN+AYFS
Sbjct: 307 LIHKKGSKVVGLHCNPLQPELLLSCGNDHFARIWDMRRLEAGSSLHNLPHGRVVNAAYFS 366

Query: 564 PHSGSKILTTSQDNRIRVWDSIFGNL 641
           P SG KILTTSQDNRIRVWDSIFGNL
Sbjct: 367 PQSGCKILTTSQDNRIRVWDSIFGNL 392


>ref|XP_002299813.1| predicted protein [Populus trichocarpa] gi|222847071|gb|EEE84618.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  344 bits (883), Expect = 7e-93
 Identities = 158/206 (76%), Positives = 187/206 (90%)
 Frame = +3

Query: 24  LVSIEKKGQLGIWDFEKVYEKTVYGDIHGCILNHMKFNPRDDGTVYGASSDGTISSTDLE 203
           L+S +KKGQ+G+WDF+KV+E+ VY +IH CI+N+M+F   +DG VY ASSDGTISSTDLE
Sbjct: 185 LLSGDKKGQVGVWDFDKVHERMVYQNIHTCIVNNMRFKSTNDGMVYAASSDGTISSTDLE 244

Query: 204 TGLTSSLMNLNPNGWQGPSTWRMLYGLDVNPEKGLVLVADNFGSLYFVDSRSNSQVGEAV 383
           TG++SSLMNLNPNGWQGPS WRMLYG+D+N EKG+VLVADNFG LY VD+RSNS++GEA+
Sbjct: 245 TGMSSSLMNLNPNGWQGPSNWRMLYGMDINSEKGVVLVADNFGFLYMVDTRSNSKIGEAI 304

Query: 384 LIHKKGSKVTGLHCNPVQPDLLLSCGNDHFARLWDIRKLETGSFLYQLSHKRVVNSAYFS 563
           LIHKKGSKV GLHCNPVQP+LLLSCGNDHFAR+WD+R+L+ GS L  L+HKRVVNSAYFS
Sbjct: 305 LIHKKGSKVVGLHCNPVQPELLLSCGNDHFARIWDMRQLKAGSSLSDLAHKRVVNSAYFS 364

Query: 564 PHSGSKILTTSQDNRIRVWDSIFGNL 641
           P SGSKILTTSQDNR+R+WDSIFGNL
Sbjct: 365 PLSGSKILTTSQDNRLRIWDSIFGNL 390


>ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMAGED DNA-BINDING 2-like
           [Cucumis sativus]
          Length = 562

 Score =  340 bits (871), Expect = 2e-91
 Identities = 154/206 (74%), Positives = 184/206 (89%)
 Frame = +3

Query: 24  LVSIEKKGQLGIWDFEKVYEKTVYGDIHGCILNHMKFNPRDDGTVYGASSDGTISSTDLE 203
           L+S +KKGQ+G+WD++KV+EK VYG+IH CI+N+M+F+P +DG +Y ASSDGTIS TD+E
Sbjct: 187 LLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTISCTDME 246

Query: 204 TGLTSSLMNLNPNGWQGPSTWRMLYGLDVNPEKGLVLVADNFGSLYFVDSRSNSQVGEAV 383
           TG +S LMNLNP+GWQGP++WRMLYG+D+NPEK  V VADNFG LY VD+RSN++ G+AV
Sbjct: 247 TGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNNRSGQAV 306

Query: 384 LIHKKGSKVTGLHCNPVQPDLLLSCGNDHFARLWDIRKLETGSFLYQLSHKRVVNSAYFS 563
           LIHKKGSKV GLHCNP+QPDLLLSCGNDHFAR+WDIR+L  GS LY L+H+RVVNSAYFS
Sbjct: 307 LIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVVNSAYFS 366

Query: 564 PHSGSKILTTSQDNRIRVWDSIFGNL 641
           P SG KILTTSQDNRIRVWDSIFGNL
Sbjct: 367 PISGCKILTTSQDNRIRVWDSIFGNL 392


>ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Cucumis sativus]
          Length = 562

 Score =  340 bits (871), Expect = 2e-91
 Identities = 154/206 (74%), Positives = 184/206 (89%)
 Frame = +3

Query: 24  LVSIEKKGQLGIWDFEKVYEKTVYGDIHGCILNHMKFNPRDDGTVYGASSDGTISSTDLE 203
           L+S +KKGQ+G+WD++KV+EK VYG+IH CI+N+M+F+P +DG +Y ASSDGTIS TD+E
Sbjct: 187 LLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTISCTDME 246

Query: 204 TGLTSSLMNLNPNGWQGPSTWRMLYGLDVNPEKGLVLVADNFGSLYFVDSRSNSQVGEAV 383
           TG +S LMNLNP+GWQGP++WRMLYG+D+NPEK  V VADNFG LY VD+RSN++ G+AV
Sbjct: 247 TGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNNRSGQAV 306

Query: 384 LIHKKGSKVTGLHCNPVQPDLLLSCGNDHFARLWDIRKLETGSFLYQLSHKRVVNSAYFS 563
           LIHKKGSKV GLHCNP+QPDLLLSCGNDHFAR+WDIR+L  GS LY L+H+RVVNSAYFS
Sbjct: 307 LIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVVNSAYFS 366

Query: 564 PHSGSKILTTSQDNRIRVWDSIFGNL 641
           P SG KILTTSQDNRIRVWDSIFGNL
Sbjct: 367 PISGCKILTTSQDNRIRVWDSIFGNL 392


>ref|XP_003615633.1| DAMAGED DNA-BINDING protein [Medicago truncatula]
           gi|355516968|gb|AES98591.1| DAMAGED DNA-BINDING protein
           [Medicago truncatula]
          Length = 571

 Score =  336 bits (861), Expect = 2e-90
 Identities = 154/206 (74%), Positives = 183/206 (88%)
 Frame = +3

Query: 24  LVSIEKKGQLGIWDFEKVYEKTVYGDIHGCILNHMKFNPRDDGTVYGASSDGTISSTDLE 203
           L+S +KKGQLG+WDFEKV+EK VY D H CILN+MKFNP +D  VY ASSDGTIS TDLE
Sbjct: 200 LLSGDKKGQLGVWDFEKVHEKVVYDDKHSCILNNMKFNPTNDCMVYSASSDGTISYTDLE 259

Query: 204 TGLTSSLMNLNPNGWQGPSTWRMLYGLDVNPEKGLVLVADNFGSLYFVDSRSNSQVGEAV 383
           TG++SSLMNLNP+GW GP+TW+MLYG+D+N EKGLVLVADNFG L+ VD RSN + G+AV
Sbjct: 260 TGMSSSLMNLNPDGWHGPNTWKMLYGMDINCEKGLVLVADNFGFLHLVDMRSNHRNGDAV 319

Query: 384 LIHKKGSKVTGLHCNPVQPDLLLSCGNDHFARLWDIRKLETGSFLYQLSHKRVVNSAYFS 563
           LIHKKGSKVTG+HCNP+QPD+LL+CGNDH+AR+WD+R+LE GS L  L HKRVVNSAYFS
Sbjct: 320 LIHKKGSKVTGIHCNPMQPDILLTCGNDHYARIWDMRRLEAGSSLCSLEHKRVVNSAYFS 379

Query: 564 PHSGSKILTTSQDNRIRVWDSIFGNL 641
           P +G+KILTTSQDNR+R+WDSIFGN+
Sbjct: 380 PITGNKILTTSQDNRLRIWDSIFGNM 405


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