BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032940
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat...   117   1e-24
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat...   113   1e-23
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]   100   2e-19

>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/129 (44%), Positives = 81/129 (62%)
 Frame = +3

Query: 57  AVWYTPPPPIPSNHQTSDPILTALTNAIQNSNXXXXXXXXXXXXXXXXANHFIKLLKHNS 236
           + W++PPPP       +DP+L A++ AI N+                  +HFI L+  N 
Sbjct: 21  STWHSPPPPAV----LADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNP 76

Query: 237 HTISPHPLFSLFTHLSSQPTFRHTLQSYCAMAVYLSDHNMYQQAQLLIQCVISRKGKDSA 416
            ++SP  LFS F  LSS PTFRHT QSYCAMA +LS H M+Q+ Q +I+ ++SRKGKDSA
Sbjct: 77  FSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSA 136

Query: 417 SAIFYSILD 443
           +++F +ILD
Sbjct: 137 ASVFAAILD 145


>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/129 (44%), Positives = 80/129 (62%)
 Frame = +3

Query: 57  AVWYTPPPPIPSNHQTSDPILTALTNAIQNSNXXXXXXXXXXXXXXXXANHFIKLLKHNS 236
           + W++PPP        +DP+L A++ AI N+                  +HFI L+  N 
Sbjct: 21  STWHSPPPLAA----LADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNP 76

Query: 237 HTISPHPLFSLFTHLSSQPTFRHTLQSYCAMAVYLSDHNMYQQAQLLIQCVISRKGKDSA 416
            ++SP  LFS F  LSS PTFRHT QSYCAMA +LS H M+Q+ Q +I+ ++SRKGKDSA
Sbjct: 77  FSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSA 136

Query: 417 SAIFYSILD 443
           +++F +ILD
Sbjct: 137 ASVFAAILD 145


>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  111 bits (278), Expect = 5e-23
 Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
 Frame = +3

Query: 18  LSTHFLHHRHLST-------AVWYTPPP-------PIPSNHQTSDPILTALTNAIQNSNX 155
           ++T  L   HLS        + WY+PPP       P PS H++  PILT ++ AI+N   
Sbjct: 1   MATFKLPKTHLSPPKTLCAFSTWYSPPPQPPPRQSPPPSRHES--PILTTISEAIKNIET 58

Query: 156 XXXXXXXXXXXXXXXANHFIKLLKHNSHTISPHPLFSLFTHLSSQPTFRHTLQSYCAMAV 335
                          A+HFI L+  N + + P  L S F  LSS PTF HT+QSYC+M  
Sbjct: 59  KPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVH 118

Query: 336 YLSDHNMYQQAQLLIQCVISRKGKDSASAIFYSILDFK 449
           +L  H M QQA+ L+  V+SRKGK SAS++F SIL+ K
Sbjct: 119 FLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETK 156


>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
           unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/140 (39%), Positives = 75/140 (53%)
 Frame = +3

Query: 48  LSTAVWYTPPPPIPSNHQTSDPILTALTNAIQNSNXXXXXXXXXXXXXXXXANHFIKLLK 227
           L  + W TPP          DPILT ++ AI+ S                  NH I L+ 
Sbjct: 21  LCFSTWMTPP-----TSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLIN 75

Query: 228 HNSHTISPHPLFSLFTHLSSQPTFRHTLQSYCAMAVYLSDHNMYQQAQLLIQCVISRKGK 407
            N H++SP  L S F  LS+Q  FR ++ SYC M  +L  H M  +AQ L+Q V+SRKGK
Sbjct: 76  LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135

Query: 408 DSASAIFYSILDFKDAHQCN 467
           +SAS++F S+L+ +  HQ N
Sbjct: 136 NSASSVFTSVLEARGTHQSN 155


>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/140 (39%), Positives = 75/140 (53%)
 Frame = +3

Query: 48  LSTAVWYTPPPPIPSNHQTSDPILTALTNAIQNSNXXXXXXXXXXXXXXXXANHFIKLLK 227
           L  + W TPP          DPILT ++ AI+ S                  NH I L+ 
Sbjct: 21  LCFSTWMTPP-----TSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLIN 75

Query: 228 HNSHTISPHPLFSLFTHLSSQPTFRHTLQSYCAMAVYLSDHNMYQQAQLLIQCVISRKGK 407
            N H++SP  L S F  LS+Q  FR ++ SYC M  +L  H M  +AQ L+Q V+SRKGK
Sbjct: 76  LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135

Query: 408 DSASAIFYSILDFKDAHQCN 467
           +SAS++F S+L+ +  HQ N
Sbjct: 136 NSASSVFTSVLEARGTHQSN 155