BLASTX nr result

ID: Bupleurum21_contig00032911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032911
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97563.1| retrotransposon protein, putative, unclassified [...   139   3e-31
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   138   5e-31
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   135   3e-30
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   135   3e-30
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   6e-30

>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 839

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/134 (47%), Positives = 97/134 (72%)
 Frame = -1

Query: 404 FYQTC*GIVGKDVVLVVQDFFRDGEI*SGCSEANVVLIPKKKILSCMGDLRLIALYNVLY 225
           FY+    ++G+ +   VQ+    G+I    +E  +VLIPK K    + DLR I++ NVLY
Sbjct: 333 FYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVKTFELIKDLRPISVCNVLY 392

Query: 224 KTVTKVMANRMKLMMDKIVADTQSAFIPGRIITDNILVSFEVLHYLKRKRKGKEGYMALK 45
           K V+KV+ANR+K ++ ++++ +QSAF PGR+I+DNILV++E+ HY+++KR G+ GY ALK
Sbjct: 393 KIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVAYELTHYMRQKRNGETGYAALK 452

Query: 44  LDTSEAYDRIEWNF 3
           LD S+AYDR+EW F
Sbjct: 453 LDMSKAYDRVEWGF 466


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/136 (49%), Positives = 96/136 (70%)
 Frame = -1

Query: 410  PAFYQTC*GIVGKDVVLVVQDFFRDGEI*SGCSEANVVLIPKKKILSCMGDLRLIALYNV 231
            P FYQ    IVG+ V      +  DG      +  N+VLIPKK  +  M DLR I+L NV
Sbjct: 1008 PXFYQRHWEIVGEXVANACIGWLNDGMFPDSLNRTNIVLIPKKSEVISMTDLRPISLCNV 1067

Query: 230  LYKTVTKVMANRMKLMMDKIVADTQSAFIPGRIITDNILVSFEVLHYLKRKRKGKEGYMA 51
            ++K  +K++ANR+K ++D +V++ QSAF+P R ITD+IL++ EVLH+LKRKR+G+ GY A
Sbjct: 1068 IFKIASKLLANRLKKVLDXVVSEAQSAFVPXRSITDSILIAHEVLHFLKRKREGRIGYXA 1127

Query: 50   LKLDTSEAYDRIEWNF 3
            LK+D S+AYD++EWN+
Sbjct: 1128 LKIDISKAYDKLEWNY 1143


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/134 (48%), Positives = 94/134 (70%)
 Frame = -1

Query: 404  FYQTC*GIVGKDVVLVVQDFFRDGEI*SGCSEANVVLIPKKKILSCMGDLRLIALYNVLY 225
            FY+ C  +VG+ V   V +  R G I  G ++  +VLIPK K    + DLR I+L NV Y
Sbjct: 711  FYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCY 770

Query: 224  KTVTKVMANRMKLMMDKIVADTQSAFIPGRIITDNILVSFEVLHYLKRKRKGKEGYMALK 45
            K V+KV+ANR+K ++  +++  QSAF+PGR+I+DNIL++ E+ HY++ KR G+ GY A K
Sbjct: 771  KLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFK 830

Query: 44   LDTSEAYDRIEWNF 3
            LD S+AYDR+EW+F
Sbjct: 831  LDMSKAYDRVEWSF 844


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/134 (48%), Positives = 94/134 (70%)
 Frame = -1

Query: 404  FYQTC*GIVGKDVVLVVQDFFRDGEI*SGCSEANVVLIPKKKILSCMGDLRLIALYNVLY 225
            FY+ C  +VG+ V   V +  R G I  G ++  +VLIPK K    + DLR I+L NV Y
Sbjct: 684  FYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCY 743

Query: 224  KTVTKVMANRMKLMMDKIVADTQSAFIPGRIITDNILVSFEVLHYLKRKRKGKEGYMALK 45
            K V+KV+ANR+K ++  +++  QSAF+PGR+I+DNIL++ E+ HY++ KR G+ GY A K
Sbjct: 744  KLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFK 803

Query: 44   LDTSEAYDRIEWNF 3
            LD S+AYDR+EW+F
Sbjct: 804  LDMSKAYDRVEWSF 817


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/134 (47%), Positives = 94/134 (70%)
 Frame = -1

Query: 404 FYQTC*GIVGKDVVLVVQDFFRDGEI*SGCSEANVVLIPKKKILSCMGDLRLIALYNVLY 225
           FYQ     +G+DV   V +   + +     ++ ++VLIPKKK      D R I+L NVLY
Sbjct: 464 FYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLY 523

Query: 224 KTVTKVMANRMKLMMDKIVADTQSAFIPGRIITDNILVSFEVLHYLKRKRKGKEGYMALK 45
           K V KV+ANRMK+++  ++ ++QS F+PGR+ITDN+LV++E  H+L++K+ GK+GY+ LK
Sbjct: 524 KIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLGLK 583

Query: 44  LDTSEAYDRIEWNF 3
           LD S+AYDR+EW F
Sbjct: 584 LDMSKAYDRVEWCF 597


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