BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032889
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   365   1e-98
ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like...   335   1e-89
ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like...   325   9e-87
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|...   316   7e-84

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  365 bits (936), Expect = 1e-98
 Identities = 179/309 (57%), Positives = 230/309 (74%), Gaps = 3/309 (0%)
 Frame = -1

Query: 1041 PRCRFHTLANSWWENFHKLGRTGEKDFRLNSLCSNIRGPEGVHTRKYIRT-VTTKTDGKR 865
            PRCR HTLA+ W E+FH LG T         L S+  G EG ++R++ R  +TTK++G+ 
Sbjct: 9    PRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRWTRRPITTKSEGRN 68

Query: 864  KVSMSRRSGVVGHEKKNETTLSSSELHTNKVEISVERKD--CVIQPNITNNKDLAKSMTL 691
            K + S +   + HE  + T  +S++L  +K+EIS  ++   C +Q  +T NKDLAK +T+
Sbjct: 69   KYTQSSKRSNIRHEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTV 128

Query: 690  IIFDIETTGFSRENERIIEIALQDLVGGENSTFQTLINPECYVPNAHVHGISTHMVNRPD 511
            I+FD ETTG SR N+RIIEI LQDL GGENSTFQTL+NPE  VPN HVHGI+T+MVNRPD
Sbjct: 129  IVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPD 188

Query: 510  VPRMKDLIPILMEYIQSRQKPGGQVMWIGHNARTFDVPFLVKEFSRCSIEIPKNWLFLDT 331
            VPR KDLIPIL++Y++SRQKPGG ++W+ HN R+FDVPFL+ EFSRC+ E+P NW FLDT
Sbjct: 189  VPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDT 248

Query: 330  LPLSRELLKIPGIKHPSKTSLQALREHYNIPLVGSAHRAMSDVYTLSLILQRMTFDLKVP 151
            LPL+REL+K  G   P   SLQALRE+Y IPLVG AHR +SDVYTLS +LQ +TF+LKV 
Sbjct: 249  LPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVS 308

Query: 150  ISGLLDRCF 124
            ++ LLDR F
Sbjct: 309  VANLLDRSF 317


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
            vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED: DNA
            polymerase III polC-type-like isoform 1 [Vitis vinifera]
          Length = 337

 Score =  365 bits (936), Expect = 1e-98
 Identities = 179/309 (57%), Positives = 230/309 (74%), Gaps = 3/309 (0%)
 Frame = -1

Query: 1041 PRCRFHTLANSWWENFHKLGRTGEKDFRLNSLCSNIRGPEGVHTRKYIRT-VTTKTDGKR 865
            PRCR HTLA+ W E+FH LG T         L S+  G EG ++R++ R  +TTK++G+ 
Sbjct: 14   PRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRWTRRPITTKSEGRN 73

Query: 864  KVSMSRRSGVVGHEKKNETTLSSSELHTNKVEISVERKD--CVIQPNITNNKDLAKSMTL 691
            K + S +   + HE  + T  +S++L  +K+EIS  ++   C +Q  +T NKDLAK +T+
Sbjct: 74   KYTQSSKRSNIRHEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTV 133

Query: 690  IIFDIETTGFSRENERIIEIALQDLVGGENSTFQTLINPECYVPNAHVHGISTHMVNRPD 511
            I+FD ETTG SR N+RIIEI LQDL GGENSTFQTL+NPE  VPN HVHGI+T+MVNRPD
Sbjct: 134  IVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPD 193

Query: 510  VPRMKDLIPILMEYIQSRQKPGGQVMWIGHNARTFDVPFLVKEFSRCSIEIPKNWLFLDT 331
            VPR KDLIPIL++Y++SRQKPGG ++W+ HN R+FDVPFL+ EFSRC+ E+P NW FLDT
Sbjct: 194  VPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDT 253

Query: 330  LPLSRELLKIPGIKHPSKTSLQALREHYNIPLVGSAHRAMSDVYTLSLILQRMTFDLKVP 151
            LPL+REL+K  G   P   SLQALRE+Y IPLVG AHR +SDVYTLS +LQ +TF+LKV 
Sbjct: 254  LPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVS 313

Query: 150  ISGLLDRCF 124
            ++ LLDR F
Sbjct: 314  VANLLDRSF 322


>ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  335 bits (859), Expect = 1e-89
 Identities = 175/308 (56%), Positives = 224/308 (72%), Gaps = 2/308 (0%)
 Frame = -1

Query: 1041 PRCRFHTLANSWWENFHKLGRTGEKDFRLNSLCSNIRGPEGVHTRKYIRTVTTKTDGKRK 862
            PRCR  +LAN W E FH    T   +  +  L S I G +G   +K+ R +TT T+GK  
Sbjct: 14   PRCRIQSLANCWGETFHGFSTTCGNNSSIRLLGSRIYGLQGGQRKKWTRPITTNTEGKG- 72

Query: 861  VSMSRRSGVVGHEKKNETTLSSSELHTNKVEI--SVERKDCVIQPNITNNKDLAKSMTLI 688
               S +S  + HE  +ET L+++  + NK ++  S E +DC IQ  I  NKDL+ S T+I
Sbjct: 73   ---STKSKSIKHEILSETILANATANVNKTQLDQSQEIQDCDIQQEIAENKDLS-SYTVI 128

Query: 687  IFDIETTGFSRENERIIEIALQDLVGGENSTFQTLINPECYVPNAHVHGISTHMVNRPDV 508
            +FDIETTGFSRENERIIEIAL+DL GGENSTFQTL+NP+C VPN+H+HGI+T MVN+PDV
Sbjct: 129  VFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTQMVNKPDV 188

Query: 507  PRMKDLIPILMEYIQSRQKPGGQVMWIGHNARTFDVPFLVKEFSRCSIEIPKNWLFLDTL 328
            PRM+DLIPIL +Y++SR+KPGG V+++ HNAR FDVPF++ E  R SI+IP NWLFLDTL
Sbjct: 189  PRMEDLIPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRYSIKIPPNWLFLDTL 248

Query: 327  PLSRELLKIPGIKHPSKTSLQALREHYNIPLVGSAHRAMSDVYTLSLILQRMTFDLKVPI 148
            PL+REL+K  G    S +SL ALR+ Y I + GSAHRAM DV TLSLIL R+T DLK+ +
Sbjct: 249  PLARELMKSGGTT-LSSSSLAALRDLYGIKVDGSAHRAMVDVNTLSLILSRLTSDLKLTL 307

Query: 147  SGLLDRCF 124
            S L+D+ F
Sbjct: 308  SDLVDKSF 315


>ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  325 bits (834), Expect = 9e-87
 Identities = 171/308 (55%), Positives = 221/308 (71%), Gaps = 2/308 (0%)
 Frame = -1

Query: 1041 PRCRFHTLANSWWENFHKLGRTGEKDFRLNSLCSNIRGPEGVHTRKYIRTVTTKTDGKRK 862
            PR R  +LAN W E FH    T   +  +  L S I G +G   +K+ R +TT  +GK  
Sbjct: 14   PRFRIQSLANCWGETFHSFSTTCGNNSNVRLLGSRIYGLQGGQRKKWTRPITTNIEGKG- 72

Query: 861  VSMSRRSGVVGHEKKNETTLSSSELHTNKVEI--SVERKDCVIQPNITNNKDLAKSMTLI 688
               S +S  + HE  +ET L+++ ++ NK ++  S E + C IQ  I  NKDL+ S T+I
Sbjct: 73   ---STKSKSIKHEILSETILANATVNVNKTQLDKSQEIQYCDIQQEIAENKDLS-SYTVI 128

Query: 687  IFDIETTGFSRENERIIEIALQDLVGGENSTFQTLINPECYVPNAHVHGISTHMVNRPDV 508
            +FDIETTGFSRENERIIEIAL+DL GGENSTFQTL+NP+C VPN+H+HGI+THMVN+P V
Sbjct: 129  VFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTHMVNKPGV 188

Query: 507  PRMKDLIPILMEYIQSRQKPGGQVMWIGHNARTFDVPFLVKEFSRCSIEIPKNWLFLDTL 328
            PRM+DLIPIL++Y++SR+KPGG V+++ HNAR FDVPF++ E  R S+EIP NWLFLDTL
Sbjct: 189  PRMEDLIPILLQYVRSREKPGGDVIFVAHNARCFDVPFIINELRRYSVEIPPNWLFLDTL 248

Query: 327  PLSRELLKIPGIKHPSKTSLQALREHYNIPLVGSAHRAMSDVYTLSLILQRMTFDLKVPI 148
            PL+REL+K  G    S TSL ALR+ Y I + GSAHRAM DV  LSLIL R+T DLK+ +
Sbjct: 249  PLARELIKSGGTT-LSSTSLAALRDLYGIKVDGSAHRAMVDVNALSLILSRLTSDLKLTL 307

Query: 147  SGLLDRCF 124
            S L+ + F
Sbjct: 308  SDLVKKSF 315


>ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|223548444|gb|EEF49935.1|
            exonuclease, putative [Ricinus communis]
          Length = 334

 Score =  316 bits (809), Expect = 7e-84
 Identities = 170/312 (54%), Positives = 221/312 (70%), Gaps = 6/312 (1%)
 Frame = -1

Query: 1041 PRCRFHTLANSWWENFHKLGRT--GEKDFRLNSLCSNIRGPEGVHTRKYIRT-VTTKTDG 871
            PRCR HT+AN W E+FH   R    +  FRL  L S   G EG ++R++IR  V+TKT+G
Sbjct: 14   PRCRLHTIANFWQESFHSSARKCGNKSSFRL--LASKSDGLEGGYSRRWIRRPVSTKTEG 71

Query: 870  KRKVSM-SRRSGVVGHEKKNETTLSSSELHTNKVEISVER--KDCVIQPNITNNKDLAKS 700
              K++    +S  + HE  +ET  +S+ L  +K EIS  +  + C I+  I  N DLAK 
Sbjct: 72   TNKITQYDSKSTNIRHEILDETVSTSATLSISKTEISEYQNIRYCDIRREILENNDLAKL 131

Query: 699  MTLIIFDIETTGFSRENERIIEIALQDLVGGENSTFQTLINPECYVPNAHVHGISTHMVN 520
            +T+I+FD+ETTGFSRE ERIIEIALQDL GGENSTFQTLINP   VPN+H+HGI+THMV 
Sbjct: 132  VTVIVFDLETTGFSREYERIIEIALQDLHGGENSTFQTLINPGRIVPNSHIHGITTHMVC 191

Query: 519  RPDVPRMKDLIPILMEYIQSRQKPGGQVMWIGHNARTFDVPFLVKEFSRCSIEIPKNWLF 340
            +P VPRM+DLIPIL++YI+SRQKPGG V+ + HN R+FDVPFL+ EF R  +++P NWLF
Sbjct: 192  KPHVPRMEDLIPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKRSGVDVPCNWLF 251

Query: 339  LDTLPLSRELLKIPGIKHPSKTSLQALREHYNIPLVGSAHRAMSDVYTLSLILQRMTFDL 160
            +DTLPL+R+ +K  G+K  S  SLQ LRE + I L GSAHRAMSDV  L+ + Q +TF+L
Sbjct: 252  MDTLPLARKWMKSKGLKISS--SLQGLREAFGIKLEGSAHRAMSDVRLLAKLFQMLTFNL 309

Query: 159  KVPISGLLDRCF 124
            K  +  L+   F
Sbjct: 310  KTTLPSLVAESF 321