BLASTX nr result

ID: Bupleurum21_contig00032883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032883
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31329.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   193   1e-47
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   189   2e-46
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44

>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  193 bits (491), Expect = 1e-47
 Identities = 86/114 (75%), Positives = 104/114 (91%)
 Frame = -3

Query: 343 IRPDHVTMIAVLSACSHSGLLIEGQMLFEKMPAVYGITPRLEHFACMVDLYGRAGLIQKA 164
           I+PDH+TMIAVLSACSHSGL+ +GQ+LFEKM ++YG+TP LEHFACM DL+GRAGL+ KA
Sbjct: 491 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKA 550

Query: 163 VEILRTMPYQPTQAMWATLIGACRNHKNTDVGEWAAKKLLEMRPQNSGYYVLIA 2
            EI+R MPY+PT AMWATLIGACR H+NT++GEWAA+KLLEM+P+N GYYVLIA
Sbjct: 551 KEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIA 604


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  193 bits (491), Expect = 1e-47
 Identities = 86/114 (75%), Positives = 104/114 (91%)
 Frame = -3

Query: 343 IRPDHVTMIAVLSACSHSGLLIEGQMLFEKMPAVYGITPRLEHFACMVDLYGRAGLIQKA 164
           I+PDH+TMIAVLSACSHSGL+ +GQ+LFEKM ++YG+TP LEHFACM DL+GRAGL+ KA
Sbjct: 536 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKA 595

Query: 163 VEILRTMPYQPTQAMWATLIGACRNHKNTDVGEWAAKKLLEMRPQNSGYYVLIA 2
            EI+R MPY+PT AMWATLIGACR H+NT++GEWAA+KLLEM+P+N GYYVLIA
Sbjct: 596 KEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIA 649


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  193 bits (491), Expect = 1e-47
 Identities = 86/114 (75%), Positives = 104/114 (91%)
 Frame = -3

Query: 343 IRPDHVTMIAVLSACSHSGLLIEGQMLFEKMPAVYGITPRLEHFACMVDLYGRAGLIQKA 164
           I+PDH+TMIAVLSACSHSGL+ +GQ+LFEKM ++YG+TP LEHFACM DL+GRAGL+ KA
Sbjct: 610 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKA 669

Query: 163 VEILRTMPYQPTQAMWATLIGACRNHKNTDVGEWAAKKLLEMRPQNSGYYVLIA 2
            EI+R MPY+PT AMWATLIGACR H+NT++GEWAA+KLLEM+P+N GYYVLIA
Sbjct: 670 KEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIA 723


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  189 bits (481), Expect = 2e-46
 Identities = 86/115 (74%), Positives = 101/115 (87%)
 Frame = -3

Query: 346 HIRPDHVTMIAVLSACSHSGLLIEGQMLFEKMPAVYGITPRLEHFACMVDLYGRAGLIQK 167
           HI+PDHVTM+AVLSACSHSGL+ EG  LFE MP+ YGI PRLEHFACMVDL+GRAGL+ K
Sbjct: 528 HIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHK 587

Query: 166 AVEILRTMPYQPTQAMWATLIGACRNHKNTDVGEWAAKKLLEMRPQNSGYYVLIA 2
           A E++  MPY+P+ AMWATL+GACR H N ++GEWAA+KLLEMRP+NSGYYVLIA
Sbjct: 588 AKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIA 642


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  181 bits (459), Expect = 6e-44
 Identities = 80/114 (70%), Positives = 100/114 (87%)
 Frame = -3

Query: 343 IRPDHVTMIAVLSACSHSGLLIEGQMLFEKMPAVYGITPRLEHFACMVDLYGRAGLIQKA 164
           I+PD VTM+AVLSACSHSGL+ EG +LFEKM  +YGI P +EHF+CMVDL+GRAGL+ KA
Sbjct: 478 IKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKA 537

Query: 163 VEILRTMPYQPTQAMWATLIGACRNHKNTDVGEWAAKKLLEMRPQNSGYYVLIA 2
            +++ +MPY+PT AMWATL+GACR H NT++GEWAA+KLLEM+P+N GYYVLIA
Sbjct: 538 KKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIA 591


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