BLASTX nr result

ID: Bupleurum21_contig00032873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032873
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...   162   1e-37
ref|XP_004152417.1| PREDICTED: putative disease resistance prote...   115   2e-23
ref|XP_002519858.1| hypothetical protein RCOM_0865530 [Ricinus c...   110   3e-22
ref|XP_004158158.1| PREDICTED: putative disease resistance prote...   108   2e-21
ref|NP_199364.2| leucine-rich repeat-containing protein [Arabido...   100   3e-19

>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1265

 Score =  162 bits (409), Expect = 1e-37
 Identities = 105/294 (35%), Positives = 159/294 (54%), Gaps = 9/294 (3%)
 Frame = +2

Query: 17   VKVLVTTTTRSSSDDGHKVAM----FEVKPLADSQLSSFLQERIDKTVPDTLAKAF---- 172
            +K+L++   R + DDG          +V+PL++    S L++R+ +    +  + F    
Sbjct: 146  LKILIS---RRNIDDGQTAETSQREIKVEPLSEEDSLSLLKKRVTRVSQSSAFEKFSNAT 202

Query: 173  LAKCESLPIADIIVIAKALNHIGKRDSAGAALVENCDVKKLLSVGYHQLPSVILYDFLWK 352
              K + LP A II++A+ALN +G+ D  GA      DV   L   Y  LPS ++ D LW 
Sbjct: 203  AEKSKGLPAA-IILMAEALNQVGEHDLDGALKEAEKDVSSFLHCAYGMLPSGVVTDCLWH 261

Query: 353  DKHFFRDYRSVHYTELITYWILEGYFGHISSIQKAFEIGHCVVMELIDCHLLKELEAGYV 532
             + FF +Y  +HY +LITYWI+EGYF  ++ ++KA+E GH V+M+L++  +LK  E   V
Sbjct: 262  CREFFHNYGGLHYNKLITYWIMEGYFDPVTDVEKAYEKGHSVLMQLLNRRMLKIQEDNIV 321

Query: 533  IVNANKLRVSNISDPRDLGFHETVTIGLAT-VSDDKWAGFGRITHKDGVVRTLFKDAKGK 709
            I+        +I D R  GF  T  +GLA+ V   +  G  +IT  DG+++TL    K K
Sbjct: 322  ILEG---ATQSIVDNRLGGFSGTANLGLASLVPGGELKGLDKITPMDGMIKTLCSGKKWK 378

Query: 710  NLTTLLLDGNRFGVEVLKNLLHSNGALQVLAVFHPTLKNLPDLVFSQKNLNVFV 871
             +  LL+ G+R   EV + L      L+VLAVF   LK LP  +   K L+V V
Sbjct: 379  EVHALLIHGSRLLREVPEKLFQRMDGLEVLAVFDLKLKQLPSSLSQLKYLHVLV 432


>ref|XP_004152417.1| PREDICTED: putative disease resistance protein At4g19050-like
           [Cucumis sativus]
          Length = 1078

 Score =  115 bits (287), Expect = 2e-23
 Identities = 90/255 (35%), Positives = 127/255 (49%), Gaps = 18/255 (7%)
 Frame = +2

Query: 161 AKAFLAKCESLPIADIIVIAKALNHIGKRDSAG----AALVE---NCDVKK--------L 295
           A+  +  C   P  + I IA+ALNHI K +        AL E    C   K        L
Sbjct: 34  AEKIIQNCGDNPTLNRI-IAEALNHIAKHNGDNWRVERALEEMDSRCSTGKTSKSKQISL 92

Query: 296 LSVGYHQLP--SVILYDFLWKDKHFFRDYRSVHYTELITYWILEGYFGHISSIQKAFEIG 469
           +  G+  LP   + + +  W  + FFR+   VHY  LIT WILE  FG + +  KA+  G
Sbjct: 93  MRYGFDMLPRSDLAMINCCWHSRQFFRNNGGVHYNVLITNWILEECFGLVDNFDKAYHQG 152

Query: 470 HCVVMELIDCHLLKELEAGYVIVNANKLRVSNISDPRDLGFHETVTIGLATVSDD-KWAG 646
           H V+M LI+  LLK  +    +V   +L V +I D R  GF    T+GL+ V +D KW G
Sbjct: 153 HEVLMNLIEHDLLKTEKDNDNVVIIEEL-VRDIPDTRYTGFVWKPTLGLSGVYEDKKWLG 211

Query: 647 FGRITHKDGVVRTLFKDAKGKNLTTLLLDGNRFGVEVLKNLLHSNGALQVLAVFHPTLKN 826
              +   DG+ RT  KD   K+++ LL+DG     EV++    +   LQVLA+F P +K 
Sbjct: 212 LDSVGPADGMTRTSEKD--WKDVSVLLVDGYHLCQEVIETYFTTLKNLQVLAIFRPRIKA 269

Query: 827 LPDLVFSQKNLNVFV 871
           LP  +    NL+  V
Sbjct: 270 LPVSLSMLGNLHFLV 284


>ref|XP_002519858.1| hypothetical protein RCOM_0865530 [Ricinus communis]
           gi|223540904|gb|EEF42462.1| hypothetical protein
           RCOM_0865530 [Ricinus communis]
          Length = 174

 Score =  110 bits (276), Expect = 3e-22
 Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 1/160 (0%)
 Frame = +2

Query: 395 ELITYWILEGYFGHISSIQKAFEIGHCVVMELIDCHLLKELEAGYVIVNANKLRVSNISD 574
           + I++W++EGY G I+ +++A+  GH ++MELI+  +LK  E   +++  + L   N+ D
Sbjct: 9   DTISHWLIEGYLGPINHVEEAYGEGHQILMELINRGVLKIQEDNIIVMEGSML---NLVD 65

Query: 575 PRDLGFHETVTIGLATVSD-DKWAGFGRITHKDGVVRTLFKDAKGKNLTTLLLDGNRFGV 751
            R  G+  T  +GLA V   DKW G GRIT  DG+++ L    KG+ ++T+L+DG+    
Sbjct: 66  HRLRGYFATAKVGLANVLKVDKWKGLGRITLVDGMIKMLHTGIKGEKISTVLIDGSHLSR 125

Query: 752 EVLKNLLHSNGALQVLAVFHPTLKNLPDLVFSQKNLNVFV 871
           EV +        L+VLA+F+P LK LP  + + +NL V V
Sbjct: 126 EVPQTFFQHMCELEVLALFYPRLKFLPSSLSNMENLLVLV 165


>ref|XP_004158158.1| PREDICTED: putative disease resistance protein At4g19050-like
           [Cucumis sativus]
          Length = 943

 Score =  108 bits (269), Expect = 2e-21
 Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 3/192 (1%)
 Frame = +2

Query: 305 GYHQLP--SVILYDFLWKDKHFFRDYRSVHYTELITYWILEGYFGHISSIQKAFEIGHCV 478
           G+  LP   + + +  W  + FFR+   VHY  LIT WILE  FG + +  KA+  GH V
Sbjct: 4   GFDMLPRSDLAMINCCWHSRQFFRNNGGVHYNVLITNWILEECFGLVDNFDKAYHQGHEV 63

Query: 479 VMELIDCHLLKELEAGYVIVNANKLRVSNISDPRDLGFHETVTIGLATVSDD-KWAGFGR 655
           +M LI+  LLK  +    +V   +L V +I D R  GF    T+GL+ V +D KW G   
Sbjct: 64  LMNLIEHDLLKTEKDNDNVVIIEEL-VRDIPDTRYTGFVWKPTLGLSGVYEDKKWLGLDS 122

Query: 656 ITHKDGVVRTLFKDAKGKNLTTLLLDGNRFGVEVLKNLLHSNGALQVLAVFHPTLKNLPD 835
           +   DG++RT  KD   K+++ LL+DG     EV++    +   LQVLA+F P +K LP 
Sbjct: 123 VGPADGMIRTSEKD--WKDVSVLLVDGYHLCQEVIETYFTTLKNLQVLAIFRPRIKALPV 180

Query: 836 LVFSQKNLNVFV 871
            +    NL+  V
Sbjct: 181 SLSMLGNLHFLV 192


>ref|NP_199364.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
           gi|334302785|sp|Q8VZC7.2|DRL36_ARATH RecName:
           Full=Probable disease resistance protein At5g45510
           gi|332007879|gb|AED95262.1| leucine-rich
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1222

 Score =  100 bits (250), Expect = 3e-19
 Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = +2

Query: 332 LYDFLWKDKHFFRDYRSVHYTELITYWILEGYFGHISSIQKAFEIGHCVVMELIDCHLLK 511
           + D  W    FF     V+Y +LIT WILEGYF  + S++KA++ GH + MELID  +LK
Sbjct: 482 ILDCFWHSLDFFEHCGCVYYRDLITQWILEGYFDPVRSVEKAYQDGHSIFMELIDRGMLK 541

Query: 512 ELEAGYVIVNANKLRVSNISDPRDLGFHETVTIGLATV-SDDKWAGFGRITHKDGVVRTL 688
             E   V+    ++ + N+ DPR  G      +G + V   +K  G G+IT  D +++T+
Sbjct: 542 IQENNVVV---PEMAMRNVIDPRRGGHLGKSRLGFSRVYGGNKRKGIGKITQLDDMIKTV 598

Query: 689 FKDAKGKNLTTLLLDGNRFGVEVLKNLLHSNGALQVLAVFHPTLK 823
            +  KG  +TT+L+ G+R      K    +   L+VL +F PT+K
Sbjct: 599 -QAKKGDKITTILVSGDRLRRVTPKKFFKNLKELEVLGLFEPTVK 642


Top