BLASTX nr result

ID: Bupleurum21_contig00032870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032870
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308057.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002285448.2| PREDICTED: putative clathrin assembly protei...   128   4e-28
emb|CBI28256.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus...   124   1e-26
ref|XP_004150528.1| PREDICTED: putative clathrin assembly protei...   120   9e-26

>ref|XP_002308057.1| predicted protein [Populus trichocarpa] gi|222854033|gb|EEE91580.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/111 (61%), Positives = 83/111 (74%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   QAERLSEFYDMCTSLDIGRGERYAKIEQPPVSFIHSMEEYIQNAPHTSIVRKDM---QAL 173
           QAERLSEFY++C S+DIGRGER+ KIEQPP SF+ +MEEY+++AP  SI RKD      +
Sbjct: 258 QAERLSEFYEICKSMDIGRGERFIKIEQPPSSFLQTMEEYVRDAPRMSIARKDQFVDNKI 317

Query: 174 DAPEVILAIECEKTP---EKLGKSPSPPEPLKVEAPV-QPDDLLGLNDPIP 314
            AP+ ILAIE +K P   E+   SP PPEP+KVE PV QP DLLGL DP+P
Sbjct: 318 AAPKEILAIEYKKEPGVEEECPPSPPPPEPVKVEEPVAQPPDLLGLGDPLP 368


>ref|XP_002285448.2| PREDICTED: putative clathrin assembly protein At5g35200 isoform 1
           [Vitis vinifera] gi|359484230|ref|XP_003633084.1|
           PREDICTED: putative clathrin assembly protein At5g35200
           isoform 2 [Vitis vinifera]
          Length = 555

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   QAERLSEFYDMCTSLDIGRGERYAKIEQPPVSFIHSMEEYIQNAPHTSIVRKDMQA---- 170
           QAE+LSEFY++C SLDI RGER+ KIEQPP SF+ +MEEY+++AP  S VRKD +     
Sbjct: 259 QAEKLSEFYEICKSLDIARGERFIKIEQPPASFLQAMEEYVRDAPRASTVRKDQETKQVV 318

Query: 171 ---LDAPEVILAIECEKTP---EKLGKSPSPPEPLKVEAP-VQPDDLLGLNDPIP 314
              L AP+V+L+IE  K P   E+   SP PPEP+KVE P V+P DLLGL+DPIP
Sbjct: 319 SEKLAAPKVVLSIEYNKAPEVQEEHPPSPPPPEPVKVEMPVVEPPDLLGLDDPIP 373


>emb|CBI28256.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   QAERLSEFYDMCTSLDIGRGERYAKIEQPPVSFIHSMEEYIQNAPHTSIVRKDMQA---- 170
           QAE+LSEFY++C SLDI RGER+ KIEQPP SF+ +MEEY+++AP  S VRKD +     
Sbjct: 259 QAEKLSEFYEICKSLDIARGERFIKIEQPPASFLQAMEEYVRDAPRASTVRKDQETKQVV 318

Query: 171 ---LDAPEVILAIECEKTP---EKLGKSPSPPEPLKVEAP-VQPDDLLGLNDPIP 314
              L AP+V+L+IE  K P   E+   SP PPEP+KVE P V+P DLLGL+DPIP
Sbjct: 319 SEKLAAPKVVLSIEYNKAPEVQEEHPPSPPPPEPVKVEMPVVEPPDLLGLDDPIP 373


>ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223528393|gb|EEF30429.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 548

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 6/110 (5%)
 Frame = +3

Query: 3   QAERLSEFYDMCTSLDIGRGERYAKIEQPPVSFIHSMEEYIQNAPHTSIVRKDM--QALD 176
           QAERLSEFY++C S+DIGRGER+ KIEQPP SF+ +MEEY++ AP  S+ ++ +    + 
Sbjct: 259 QAERLSEFYEICKSMDIGRGERFIKIEQPPASFLQTMEEYVREAPRMSVRKEQVVENKIT 318

Query: 177 APEVILAIECEKTP---EKLGKSPSPPEPLKVEAP-VQPDDLLGLNDPIP 314
           AP+ +LAIE +K P   E+   SP PPEP+KVE P V+P DLLGL+DP+P
Sbjct: 319 APKEVLAIEYKKEPEVKEEHPPSPPPPEPVKVEVPVVEPPDLLGLDDPVP 368


>ref|XP_004150528.1| PREDICTED: putative clathrin assembly protein At5g35200-like
           [Cucumis sativus] gi|449526473|ref|XP_004170238.1|
           PREDICTED: putative clathrin assembly protein
           At5g35200-like [Cucumis sativus]
          Length = 554

 Score =  120 bits (302), Expect = 9e-26
 Identities = 66/118 (55%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
 Frame = +3

Query: 3   QAERLSEFYDMCTSLDIGRGERYAKIEQPPVSFIHSMEEYIQNAPHTSIVRKDMQA---L 173
           QAERLSEFY++C SLDIGRGE++ KIEQPP SF+ +MEEY++ AP  S VRK+  A   L
Sbjct: 259 QAERLSEFYEVCKSLDIGRGEKFIKIEQPPPSFLQAMEEYVREAPRVSTVRKEQVADNKL 318

Query: 174 DAPEVILAIECEKTP---------EKLGKSPSPPEPLKVEAPV-QPDDLLGLNDPIPE 317
            AP+ +LAIE +K P              SP PPEP+KVE  V +  DLLGLNDP+PE
Sbjct: 319 AAPKEVLAIEYKKEPGAQVEQTVAPPPAPSPPPPEPVKVEPVVTEQPDLLGLNDPVPE 376


Top