BLASTX nr result

ID: Bupleurum21_contig00032868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032868
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34545.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002297934.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
dbj|BAD94245.1| hypothetical protein [Arabidopsis thaliana]            90   3e-16
ref|NP_565234.1| Spc97 / Spc98 family of spindle pole body (SBP)...    89   7e-16
ref|XP_002889303.1| hypothetical protein ARALYDRAFT_316935 [Arab...    88   9e-16

>emb|CBI34545.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/139 (43%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = +3

Query: 156 MDTEDILGSNRIEDVSWLCCLSEPELDLLMQLKTMVI-RADVSKHKSLARNFDLKILRAL 332
           MD + +LGSNR+EDV+WLC LS+ ELD+L+ LK MV+ RA V  H+ LA  FDLK+LRAL
Sbjct: 1   MDIQLVLGSNRLEDVNWLCSLSDSELDMLISLKMMVLRRAKVIGHEDLAEKFDLKMLRAL 60

Query: 333 GLIVMQLFKQGIDNMSDNPVLEDICTSLDRCNLLKQEVDDGSNSLSMEELRALIGSGRRK 512
           G I+M+  +  + ++S  P L  +   L+ CNLLK  + D   ++S EEL+A I +  ++
Sbjct: 61  GFILMEYLRGQVKDLSAIPGLAGLDKFLNECNLLKCSLKD---TISTEELKACICTNSKR 117

Query: 513 RAAEIYNEVVCKDPKRRKS 569
             AE  ++ +  + K++K+
Sbjct: 118 GTAERSSKELAPNRKKQKT 136


>ref|XP_002297934.1| predicted protein [Populus trichocarpa] gi|222845192|gb|EEE82739.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
 Frame = +3

Query: 165 EDILGSNRIEDVSWLCCLSEPELDLLMQLKTMVI-RADVSKHKSLARNFDLKILRALGLI 341
           +DILG+N  E + WLC LSE ELD+L++LK++++ RA V  H  LA+NFDL  LRA+ L+
Sbjct: 5   QDILGNNSPEVIRWLCNLSESELDMLIRLKSLILHRAKVLGHDELAKNFDLPTLRAIALL 64

Query: 342 VMQLFKQGIDNMSDNPVLEDICTSLDRCNLLKQEVDDGSNSLSMEELRALIGSGRRKRAA 521
           +M+  K    + S    L  +    + CNLL  E + G +S SMEEL+A IG   RKR  
Sbjct: 65  LMEYLKGKFKHSSQVQGLTKLVVFPECCNLL--EGNPGEDS-SMEELKACIGIDERKRPT 121

Query: 522 EIYNEVVCKDPKRR 563
           E   E   K  K+R
Sbjct: 122 ERPGEEATKQKKQR 135


>dbj|BAD94245.1| hypothetical protein [Arabidopsis thaliana]
          Length = 127

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = +3

Query: 171 ILGSNRIEDVSWLCCLSEPELDLLMQLKTMVI-RADVSKHKSLARNFDLKILRALGLIVM 347
           IL +NR +D++W C LSE ELDLL+ LK + I RA +S H+ LA  FDLK+LR+LGL++M
Sbjct: 7   ILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRSLGLVLM 66

Query: 348 QLFKQGIDN-MSDNPVLEDICTSLDRCNLLKQEVDDGSNSLSMEELRALIGSGRRKRAA 521
           +  K+ + N  S  P +      LD CNLLK  VDD   ++ +EE+   I   + K+ A
Sbjct: 67  EHAKKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDD---AVDIEEILTQICDNKSKKKA 122


>ref|NP_565234.1| Spc97 / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana] gi|42572197|ref|NP_974189.1|
           Spc97 / Spc98 family of spindle pole body (SBP)
           component [Arabidopsis thaliana]
           gi|145327753|ref|NP_001077852.1| Spc97 / Spc98 family of
           spindle pole body (SBP) component [Arabidopsis thaliana]
           gi|111074472|gb|ABH04609.1| At1g80245 [Arabidopsis
           thaliana] gi|332198254|gb|AEE36375.1| Spc97 / Spc98
           family of spindle pole body (SBP) component [Arabidopsis
           thaliana] gi|332198255|gb|AEE36376.1| Spc97 / Spc98
           family of spindle pole body (SBP) component [Arabidopsis
           thaliana] gi|332198256|gb|AEE36377.1| Spc97 / Spc98
           family of spindle pole body (SBP) component [Arabidopsis
           thaliana]
          Length = 127

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = +3

Query: 171 ILGSNRIEDVSWLCCLSEPELDLLMQLKTMVI-RADVSKHKSLARNFDLKILRALGLIVM 347
           IL +NR +D++W C LSE ELDLL+ LK + I RA +S H+ LA  FDLK+LR+LGL++M
Sbjct: 7   ILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRSLGLVLM 66

Query: 348 QLFKQGIDN-MSDNPVLEDICTSLDRCNLLKQEVDDGSNSLSMEELRALIGSGRRKRAA 521
           +  ++ + N  S  P +      LD CNLLK  VDD   ++ +EE+   I   + K+ A
Sbjct: 67  EHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDD---AVDIEEILTQICDNKSKKKA 122


>ref|XP_002889303.1| hypothetical protein ARALYDRAFT_316935 [Arabidopsis lyrata subsp.
           lyrata] gi|297335144|gb|EFH65562.1| hypothetical protein
           ARALYDRAFT_316935 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +3

Query: 159 DTEDILGSNRIEDVSWLCCLSEPELDLLMQLKTMVI-RADVSKHKSLARNFDLKILRALG 335
           +   +L +NR +D++W C LSE ELDLL+ LK + I RA +S H+ LA  FDLK+LRALG
Sbjct: 3   ELSQLLKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRALG 62

Query: 336 LIVMQLFKQGI-DNMSDNPVLEDICTSLDRCNLLKQEVDDGSNSLSMEELRALIGSGRRK 512
           L++M+  ++ + D+    P +      LD CNLLK   DD   ++ MEE+   I   + K
Sbjct: 63  LVLMEYVRKRVQDDTCLAPSVVHQLMLLDNCNLLKTHEDD---TVDMEEILTQICENKSK 119

Query: 513 RAA 521
           + A
Sbjct: 120 KKA 122


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