BLASTX nr result

ID: Bupleurum21_contig00032865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032865
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001117432.1| RING/FYVE/PHD zinc finger-containing protein...    85   2e-14
gb|EEC68900.1| hypothetical protein OsI_37561 [Oryza sativa Indi...    81   2e-13
ref|XP_003575551.1| PREDICTED: uncharacterized protein LOC100845...    80   4e-13
ref|XP_002307485.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
gb|EEE53135.1| hypothetical protein OsJ_35943 [Oryza sativa Japo...    80   5e-13

>ref|NP_001117432.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|225898006|dbj|BAH30335.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193874|gb|AEE31995.1|
           RING/FYVE/PHD zinc finger-containing protein
           [Arabidopsis thaliana]
          Length = 431

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
 Frame = +2

Query: 11  PAKERAWRGIIEVVEYGRIKFSEEMSARLSAEVSRKAFDFSLSLESKLEINLHPRSDFYP 190
           P K   WRG++ V + G     + + A +S+    K  + + SL+ +L   + PR + +P
Sbjct: 287 PIKIPIWRGLMSV-KGGNSCTMDGIVAHVSSLACPKVHETASSLKGRLSAEILPRLEVWP 345

Query: 191 QIF-EEACPDRDDIALYIYPTKDPRSKEQYSQLLKEMTMKDLMMRTCMNDRELLVYPSRI 367
           + F +   P  + +AL+ +P+ +   ++ +  L+ +M   D  MR  +ND ELL++ S +
Sbjct: 346 KTFLKNGGPKDESVALFFFPSSESNDEKVFDSLVDKMKKNDSAMRCVLNDAELLLFTSYM 405

Query: 368 LVADSQTLNNNYFMWGVFRPR 430
           L  DS T N+ Y++WGVF+PR
Sbjct: 406 LPKDSWTFNSKYYLWGVFKPR 426


>gb|EEC68900.1| hypothetical protein OsI_37561 [Oryza sativa Indica Group]
          Length = 530

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 45/140 (32%), Positives = 75/140 (53%)
 Frame = +2

Query: 11  PAKERAWRGIIEVVEYGRIKFSEEMSARLSAEVSRKAFDFSLSLESKLEINLHPRSDFYP 190
           P  E  W GI ++     I FS    A LS +  +K +D S+S+ S +++    RS  +P
Sbjct: 248 PIDEPIWSGIFKIGGNDYIPFS----AHLSTKSCKKVWDLSVSIPSIVQVTKLSRSVVWP 303

Query: 191 QIFEEACPDRDDIALYIYPTKDPRSKEQYSQLLKEMTMKDLMMRTCMNDRELLVYPSRIL 370
           +  E + P  D I LY +P K  R  +   QL+KE+  KD+ +   + + ++L++PS +L
Sbjct: 304 KSLEASSPTDDSIGLYFFPPK-MRLDKGMDQLVKEIVEKDMALSAVIGEAQMLMFPSTLL 362

Query: 371 VADSQTLNNNYFMWGVFRPR 430
               QT    +++WGVF+ R
Sbjct: 363 PEKYQTFQGKHYLWGVFKCR 382


>ref|XP_003575551.1| PREDICTED: uncharacterized protein LOC100845718 [Brachypodium
            distachyon]
          Length = 907

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = +2

Query: 29   WRGIIEVVEYGRI-KFSEEMSARLSAEVSRKAFDFSLSLESKLEINLHPRSDFYPQIFEE 205
            W+G  E+   G+  +  E +   LS+  S K  + +    SK+++   PR + +P  F E
Sbjct: 615  WQGCFELWRTGKSPELCEGLQVHLSSSASPKVLEIAKKFPSKIQLEELPRQNLWPLQFHE 674

Query: 206  ACPDRDDIALYIYPTKDPRSKEQYSQLLKEMTMKDLMMRTCMNDRELLVYPSRILVADSQ 385
              P  D I L+ +       +  Y++L++ M   DL +R  +   ELL++PS IL  + Q
Sbjct: 675  NVPIYDSIGLFFFARDIQSYENHYNKLVENMLKDDLALRGNIETAELLIFPSNILSKNFQ 734

Query: 386  TLNNNYFMWGVFRPRMDG 439
              N  Y++WGVFR R +G
Sbjct: 735  RWNMLYYLWGVFRVRRNG 752


>ref|XP_002307485.1| predicted protein [Populus trichocarpa] gi|222856934|gb|EEE94481.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
 Frame = +2

Query: 11  PAKERAWRGIIEVVE--YGRIKFSEEMSARLSAEVSRKAFDFSLSLESKLEINLHPRSDF 184
           P ++  WRG + + +  YG       + A LS+    +A + +  L   L   L PRS  
Sbjct: 273 PIRDPIWRGSMSIFQNNYGA---PGGIVAHLSSIACSRASEEAKGLSGLLSPELLPRSGV 329

Query: 185 YPQIFEEACPDRDDIALYIYPTKDPRSKEQYSQLLKEMTMKDLMMRTCMNDRELLVYPSR 364
           +P+ F +  P  D I LY +P  + R++  +  L+ +M  +DL MR  + + ELL+Y SR
Sbjct: 330 WPKSFRKLGPAADHIGLYFFPDNE-RNEIVFDSLVNDMISQDLAMRVVIENAELLIYTSR 388

Query: 365 ILVADSQTLNNNYFMWGVFRPR 430
           IL  D     + +++WGVFRP+
Sbjct: 389 ILPMDCWRFQSKFYLWGVFRPK 410


>gb|EEE53135.1| hypothetical protein OsJ_35943 [Oryza sativa Japonica Group]
          Length = 1305

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 11   PAKERAWRGIIEVVEYGRI-KFSEEMSARLSAEVSRKAFDFSLSLESKLEINLHPRSDFY 187
            P  +  W+G  E+   GR  +  +   A LS   S K  + +    SK+++   PR + +
Sbjct: 783  PELDFIWQGGFELWRTGRSPELCDGFQAHLSCSASPKVLEVAKKFPSKVQLEELPRQNSW 842

Query: 188  PQIFEEACPDRDDIALYIYPTKDPRSKEQYSQLLKEMTMKDLMMRTCMNDRELLVYPSRI 367
            P  F+E  P  ++I L+ +       +  YS+L++ M   DL +R  +   ELL++PS I
Sbjct: 843  PTQFQENGPSYENIGLFFFARDTDSYENYYSKLVENMLKNDLALRGNIETAELLIFPSNI 902

Query: 368  LVADSQTLNNNYFMWGVFRPR 430
            L  + Q  N  YF+WGVFR R
Sbjct: 903  LSKNFQRWNMFYFLWGVFRVR 923


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