BLASTX nr result

ID: Bupleurum21_contig00032854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032854
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]         80   2e-13
ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Viti...    80   2e-13
emb|CBI16598.3| unnamed protein product [Vitis vinifera]               72   5e-11
gb|ADL36699.1| GATA domain class transcription factor [Malus x d...    72   6e-11
ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyra...    69   4e-10

>dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]
          Length = 256

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = +2

Query: 23  HHNSSVDHTFTTTSSA--AMHFNSASDFTPDLCVPNDDVAELEWLSNFVDDSYSNFPVSD 196
           HH    D++   T++   A+  N + DFT +LCVP+DDVAELEWLSNFV+DS+SNFP + 
Sbjct: 45  HHQPHSDNSSAATANYYDALLPNCSDDFTDNLCVPSDDVAELEWLSNFVEDSFSNFPTNS 104

Query: 197 FAGTMN-SRGAETAFHGXXXXXXXXXXXXXITNTWTSIPQS 316
             GTMN S  +  +FH               T++WTS  Q+
Sbjct: 105 ITGTMNLSSNSTASFHSRSRSKRSRS-----TSSWTSSLQN 140


>ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Vitis vinifera]
          Length = 270

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = +2

Query: 80  FNSASDFTPDLCVPNDDVAELEWLSNFVDDSYSNFPVSDFAGTMNSRGAETAFHGXXXXX 259
           F+SA DFT DLCVP+DDVAELEWLSNFVDDS+++FP ++ AGT+ +R  +++F G     
Sbjct: 60  FHSA-DFTDDLCVPSDDVAELEWLSNFVDDSFADFPENELAGTVMAR-PDSSFPG--RTR 115

Query: 260 XXXXXXXXITNTWTSIPQSHVPM 328
                       WTS+P S +PM
Sbjct: 116 SKRSRASSTNKVWTSLPVSEIPM 138


>emb|CBI16598.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/55 (63%), Positives = 47/55 (85%)
 Frame = +2

Query: 80  FNSASDFTPDLCVPNDDVAELEWLSNFVDDSYSNFPVSDFAGTMNSRGAETAFHG 244
           F+SA DFT DLCVP+DDVAELEWLSNFVDDS+++FP ++ AGT+ +R  +++F G
Sbjct: 60  FHSA-DFTDDLCVPSDDVAELEWLSNFVDDSFADFPENELAGTVMAR-PDSSFPG 112


>gb|ADL36699.1| GATA domain class transcription factor [Malus x domestica]
          Length = 239

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 23  HHNSSVDHTF-TTTSSAAMHFNSASDFTPDLCVPNDDVAELEWLSNFVDDSYSNFPVSDF 199
           HH    DH   TTT+S      + +DFT +LCVP+DDVAELEWLS FVDDS+++FP +D 
Sbjct: 28  HHPPPPDHLHGTTTTSLFAPATTYTDFTNNLCVPSDDVAELEWLSRFVDDSFTDFPTTDL 87

Query: 200 AGT 208
            G+
Sbjct: 88  TGS 90


>ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322401|gb|EFH52822.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 240

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/96 (38%), Positives = 50/96 (52%)
 Frame = +2

Query: 35  SVDHTFTTTSSAAMHFNSASDFTPDLCVPNDDVAELEWLSNFVDDSYSNFPVSDFAGTMN 214
           S ++ F   SSA       +DFT DLCVP+DD A LEWLS FVDDS+S+FP +    T+ 
Sbjct: 39  SSENPFNFPSSAYTSPPLLTDFTHDLCVPSDDAAHLEWLSRFVDDSFSDFPANPLTMTVR 98

Query: 215 SRGAETAFHGXXXXXXXXXXXXXITNTWTSIPQSHV 322
               E +F G             +  TW  +P+S +
Sbjct: 99  ---PEISFTGKPRSRRSRAPAPSVAGTWAPMPESEL 131


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