BLASTX nr result

ID: Bupleurum21_contig00032829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032829
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   150   1e-34
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   124   8e-27
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   117   8e-25
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   102   4e-20
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    98   6e-19

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  150 bits (378), Expect = 1e-34
 Identities = 63/92 (68%), Positives = 77/92 (83%)
 Frame = -3

Query: 276 RGYQGGGSNWRHRKLEMPLFEGSDPDGWILRGEKYFSFYHLNEEEKLEAAVVSMEGDALR 97
           RG+ G G NWRH+KL+MP F+ +DPDGWILRGE++F+FY L + EK+EAAVV+MEGDALR
Sbjct: 163 RGHSGPGGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALR 222

Query: 96  WYQWENKRRPIRSWVDLKELVLQQFRPVNAGS 1
           WYQWENKRRP R+W  +K  VL QFRP+N GS
Sbjct: 223 WYQWENKRRPFRNWESMKSFVLTQFRPLNVGS 254


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  124 bits (311), Expect = 8e-27
 Identities = 51/91 (56%), Positives = 75/91 (82%)
 Frame = -3

Query: 273 GYQGGGSNWRHRKLEMPLFEGSDPDGWILRGEKYFSFYHLNEEEKLEAAVVSMEGDALRW 94
           G++GGGS WR +KL++P+F G++PDGWI+R E++F FY L E+EK+EAAVVS++G+AL W
Sbjct: 90  GFRGGGS-WRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLW 148

Query: 93  YQWENKRRPIRSWVDLKELVLQQFRPVNAGS 1
           YQWEN+RRPI  W +++ ++L++FR    GS
Sbjct: 149 YQWENRRRPIHRWSEMRWMLLRRFRETALGS 179


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  117 bits (294), Expect = 8e-25
 Identities = 49/94 (52%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
 Frame = -3

Query: 273 GYQGG---GSNWRHRKLEMPLFEGSDPDGWILRGEKYFSFYHLNEEEKLEAAVVSMEGDA 103
           GY+GG   G  W+ ++L++P+F G++PDGWILR E+YF FY L  EE+LEAAVV+++G+A
Sbjct: 66  GYEGGFRGGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEA 125

Query: 102 LRWYQWENKRRPIRSWVDLKELVLQQFRPVNAGS 1
           L W+QWE++ RPI  W ++K ++L+QFR    GS
Sbjct: 126 LLWFQWEHRHRPITGWPEMKAMLLRQFRDTALGS 159


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  QGGGSNWR-HRKLEMPLFEGSDPDGWILRGEKYFSFYHLNEEEKLEAAVVSMEGDALRWY 91
            +GG   WR  R++EMP+F G +PDGWI R ++YF+ Y L EEEKL AA +S++GDAL WY
Sbjct: 761  RGGNGEWRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWY 820

Query: 90   QWENKRRPIRSWVDLKELVLQQFRPVNAGS 1
            QW + R    SW +LK  +L +FR    GS
Sbjct: 821  QWTDSREVFGSWENLKRRLLLRFRLTQEGS 850


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = -3

Query: 240 RKLEMPLFEGSDPDGWILRGEKYFSFYHLNEEEKLEAAVVSMEGDALRWYQWENKRRPIR 61
           RKL++P+FEG +PDGWI R E+YF   ++   ++L+AA V +EGDAL W+QWE  RRP R
Sbjct: 106 RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFR 165

Query: 60  SWVDLKELVLQQFRPVNAGS 1
           SWVD KE ++  FR    G+
Sbjct: 166 SWVDFKESLIVCFRSTQEGT 185


Top