BLASTX nr result

ID: Bupleurum21_contig00032809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032809
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526530.1| suppression of tumorigenicity, putative [Ric...    58   9e-07
ref|XP_004157574.1| PREDICTED: uncharacterized LOC101209770 [Cuc...    55   4e-06
ref|XP_004140670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   4e-06
ref|XP_002884193.1| predicted protein [Arabidopsis lyrata subsp....    55   6e-06

>ref|XP_002526530.1| suppression of tumorigenicity, putative [Ricinus communis]
           gi|223534091|gb|EEF35808.1| suppression of
           tumorigenicity, putative [Ricinus communis]
          Length = 765

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -3

Query: 148 ENDKLSCSSDKVARDDEIMEWAKENNNALLQIVCSYHSIHFPDRGGEI 5
           E+D+L  + +K   D+ IMEWAKEN N LLQIVC YHS+  P +G +I
Sbjct: 460 EDDELFANREKDFDDELIMEWAKENKNELLQIVCGYHSMPLPQQGSDI 507


>ref|XP_004157574.1| PREDICTED: uncharacterized LOC101209770 [Cucumis sativus]
          Length = 104

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -3

Query: 148 ENDKLSCSSDKVARDDEIMEWAKENNNALLQIVCSYHSIHFPDRGGEI 5
           E+D L  +S+K   DD IMEWA+EN   +LQIVC YHS+  P+RG E+
Sbjct: 6   EDDDLFPNSEKEFGDDLIMEWARENKYDVLQIVCGYHSLPVPERGCEL 53


>ref|XP_004140670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101209770 [Cucumis sativus]
          Length = 835

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -3

Query: 148 ENDKLSCSSDKVARDDEIMEWAKENNNALLQIVCSYHSIHFPDRGGEI 5
           E+D L  +S+K   DD IMEWA+EN   +LQIVC YHS+  P+RG E+
Sbjct: 485 EDDDLFPNSEKEFGDDLIMEWARENKYDVLQIVCGYHSLPVPERGCEL 532


>ref|XP_002884193.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330033|gb|EFH60452.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 969

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
 Frame = -3

Query: 232 VACVSPRIQKMDR--IAXXXXXXXXXXXXDENDKLSCSSDKVARDDEIMEWAKENNNALL 59
           V C  PR Q ++R                DE D LS S +    DD I+EWAK++NN  L
Sbjct: 626 VTCADPRTQPIERNESCESVFSSARSVLSDEIDDLSNSENDFG-DDLILEWAKDHNNDSL 684

Query: 58  QIVCSYHSIHFPDRGGEI 5
           Q+VC YHS+  P RG E+
Sbjct: 685 QLVCGYHSLAIPSRGSEV 702


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