BLASTX nr result
ID: Bupleurum21_contig00032792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032792 (394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 ref|XP_002877469.1| predicted protein [Arabidopsis lyrata subsp.... 66 3e-09 ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232... 60 1e-07 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 60 2e-07 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 71.2 bits (173), Expect = 8e-11 Identities = 31/104 (29%), Positives = 48/104 (46%) Frame = -3 Query: 377 SIWVRWLHDSYFRSKPFWTASIPRGCCWSLRQILRARPKAMTHFRRVIGSGSNTLLWHDP 198 SIW W+ + R + FWT P+ C W+ +IL+ R A + +IG G T LW D Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247 Query: 197 WVTQCPLIHLFGSGIISTLESTNLATVDSILIDGAWRIPSNHVV 66 W PL +G I A V+ ++ + W+ P+ + Sbjct: 248 WHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAI 291 >ref|XP_002877469.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323307|gb|EFH53728.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 328 Score = 66.2 bits (160), Expect = 3e-09 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Frame = -3 Query: 386 RTNSIWVRWLHDSYFRSKPFWTASIPRGCCWS--LRQILRARPKAMTHFRRVIGSGSNTL 213 R S+WV W+ Y + P WT + + +S R++L+ RPK + F IG+ +T Sbjct: 40 RDGSLWVAWIRSKYLFTSPLWTLN-GKNASYSRIFRKLLQLRPKVLKFFSIKIGNSDSTF 98 Query: 212 LWHDPWVTQCPLIHLFGSGIISTLESTNLATVDSILIDGAWRIPSNHVVAMELRH 48 W DPW L H GS + L + +TV + I+ W +P+ L H Sbjct: 99 FWWDPWTPFGSLYHFLGSDGPTHLGISLFSTVAELRIEDGWSLPNARSEKQVLLH 153 >ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232257, partial [Cucumis sativus] Length = 297 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Frame = -3 Query: 386 RTNSIWVRWLHDSYFRSKPFWTASIPRGCCWSLRQILRARPKAMTHFRRVIGSGSNTLLW 207 ++ S+WV W+ + + W G W R+ILR + H + +G+G +W Sbjct: 113 KSGSLWVAWVESYILKGRSLWEIDAGVGRSWCFREILRKQDILKAHVKMEVGNGRKYRVW 172 Query: 206 HDPWVTQCPLIHLFGSGIISTLEST-NLATVDSILIDGAWRIPSNHVVAMEL 54 PW+ P+I FG +I S + + VD + D WR P ++ M++ Sbjct: 173 LVPWIQGGPIIQQFGERVIYDASSRWDASLVDFMGRDDDWRWPLVYLDLMDI 224 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/92 (29%), Positives = 42/92 (45%) Frame = -3 Query: 341 RSKPFWTASIPRGCCWSLRQILRARPKAMTHFRRVIGSGSNTLLWHDPWVTQCPLIHLFG 162 R + FWT P+ C W+ +IL+ R A + +IG G T LW D W PL +G Sbjct: 1073 RGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYG 1132 Query: 161 SGIISTLESTNLATVDSILIDGAWRIPSNHVV 66 I A V+ ++ + W+ P+ + Sbjct: 1133 ERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAI 1164 >ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] Length = 288 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -3 Query: 377 SIWVRWLHDSYFRSKPFWTASIPRGCCWSLRQILRARPKAMTHFRRVIGSGSNTLLWHDP 198 S+WV W+ + + W + G W R ILR R H + +G+G +W DP Sbjct: 48 SLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKRDILKAHVKMEVGNGKKCRVWLDP 107 Query: 197 WVTQCPLIHLFGSGIISTLESTNLA-TVDSILIDGAWR 87 + P+I FG +I +S A VD + DG WR Sbjct: 108 RIQGGPIIQQFGERVIYDADSRRDARLVDFMGRDGDWR 145