BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032783
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   198   4e-49
emb|CBI15198.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...   130   1e-28
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...   129   2e-28
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25

>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/156 (58%), Positives = 124/156 (79%)
 Frame = +2

Query: 5   NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAV 184
           N+ LK YL S   +K LL F  LL K+ S IDS+S+++ +K CT K  + EGKQ+H + +
Sbjct: 38  NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVI 97

Query: 185 KFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIG 364
            FG+EPIIFL+TSLI+MYS+  NVADAH MF+EIP+KN++ WT++ISAYVDN++P++ + 
Sbjct: 98  NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQ 157

Query: 365 LFREMLVGDVEPDQVTYTVALSACANLGALDVGEWV 472
           LFR+M + DV+PD VT TVALSACA+LGALD+GEW+
Sbjct: 158 LFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWI 193



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
 Frame = +2

Query: 23  YLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAVKFGYEP 202
           Y++++   KAL LF  +   D    D  ++   +  C   G +  G+ IH      G + 
Sbjct: 146 YVDNQRPNKALQLFRQMQMDDVQP-DIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 204

Query: 203 IIFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIGLFREML 382
            + L  SLINMYS    +  A ++F+    K+V  WT++I  +  + +  E + LF EM 
Sbjct: 205 DLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 264

Query: 383 VGD----------------VEPDQVTYTVALSACANLGALDVGE 466
             +                V P+ VT+   L AC++ G ++ G+
Sbjct: 265 ETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGK 308


>emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/156 (58%), Positives = 124/156 (79%)
 Frame = +2

Query: 5    NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAV 184
            N+ LK YL S   +K LL F  LL K+ S IDS+S+++ +K CT K  + EGKQ+H + +
Sbjct: 599  NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVI 658

Query: 185  KFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIG 364
             FG+EPIIFL+TSLI+MYS+  NVADAH MF+EIP+KN++ WT++ISAYVDN++P++ + 
Sbjct: 659  NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQ 718

Query: 365  LFREMLVGDVEPDQVTYTVALSACANLGALDVGEWV 472
            LFR+M + DV+PD VT TVALSACA+LGALD+GEW+
Sbjct: 719  LFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWI 754


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
 Frame = +2

Query: 5   NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCT-RKGLVTEGKQIHGIA 181
           N  LK YL S    KALL F +   +  S +DS+S+L+ IKV + +K    +G+QIH + 
Sbjct: 32  NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91

Query: 182 VKFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIPTK-NVVCWTALISAYVDNKKPSEG 358
            K G+  +I ++TSL+  YSS+ +V  A Q+F+E P K N+V WTA+ISAY +N+   E 
Sbjct: 92  RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151

Query: 359 IGLFREMLVGDVEPDQVTYTVALSACANLGALDVGE 466
           I LF+ M    +E D V  TVALSACA+LGA+ +GE
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
 Frame = +2

Query: 23  YLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAVKFGYEP 202
           Y  ++   +A+ LF  +  +   L D   +   +  C   G V  G++I+  ++K     
Sbjct: 142 YTENENSVEAIELFKRMEAEKIEL-DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200

Query: 203 I--IFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIGLFRE 376
              + LR SL+NMY        A ++F+E   K+V  +T++I  Y  N +  E + LF++
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260

Query: 377 MLVGD------VEPDQVTYTVALSACANLGALDVGE 466
           M   D      + P+ VT+   L AC++ G ++ G+
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
 Frame = +2

Query: 5   NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCT-RKGLVTEGKQIHGIA 181
           N  LK+YL S    KALL F +   +  S +DS+S+L+ IK  + +K    +G+QIH + 
Sbjct: 32  NHTLKHYLESGEPIKALLNFQHRFRESPSFVDSFSVLFAIKASSAQKASSFDGRQIHALV 91

Query: 182 VKFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIPTK-NVVCWTALISAYVDNKKPSEG 358
            K G+  +I ++TSL+  YSS  ++ DA Q+F+E P K N+V WTA+ISAY +N+   E 
Sbjct: 92  RKLGFNAVIQIQTSLVGFYSSAGDLDDARQVFDETPEKQNIVLWTAMISAYSENENSVEA 151

Query: 359 IGLFREMLVGDVEPDQVTYTVALSACANLGALDVGEWV 472
           I LF+ M    +E D+V  T ALSACA+LGA+ +GE +
Sbjct: 152 IKLFKRMEEEKIELDEVIVTAALSACADLGAVQMGEQI 189



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
 Frame = +2

Query: 23  YLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAVKFGYEP 202
           Y  ++   +A+ LF  +  +   L D   +   +  C   G V  G+QI+  ++K     
Sbjct: 142 YSENENSVEAIKLFKRMEEEKIEL-DEVIVTAALSACADLGAVQMGEQIYSRSIKRKRRL 200

Query: 203 I--IFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIGLFRE 376
              + LR SL+NMY     +  A ++F+E   K+V  +T +I  Y  N +  E + LF++
Sbjct: 201 AMDLTLRNSLLNMYVKSGEIEKARKLFDETMRKDVTTYTCMIFGYALNGEAQESLELFKK 260

Query: 377 MLVGD------VEPDQVTYTVALSACANLGALDVGE 466
           M + D      + P+ VT+   L AC++ G ++ G+
Sbjct: 261 MKMIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/156 (38%), Positives = 87/156 (55%)
 Frame = +2

Query: 5   NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAV 184
           N  +  YL S  Y  AL +F  LL   +   D  +++  + VC R GL+  GK+IHG+  
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFT 258

Query: 185 KFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIG 364
             G+   +F+ +SLI+MYS    + DA ++F+ IP +N VCWT++I+ Y  +    E I 
Sbjct: 259 GSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIE 318

Query: 365 LFREMLVGDVEPDQVTYTVALSACANLGALDVGEWV 472
           LFREM +G    D  T    LSAC + GAL  G W+
Sbjct: 319 LFREMQIGGFAADAATIACVLSACGHWGALAQGRWI 354



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/157 (33%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +2

Query: 5   NEALKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAV 184
           N   + Y  S    + + L+ NL+ ++ +L D+YS  +V+K C R  L+ +G++IH   +
Sbjct: 96  NFMFRAYSRSSFPAETIALY-NLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTL 154

Query: 185 KFGYEPIIFLRTSLINMYSSLANVADAHQMFEEIP--TKNVVCWTALISAYVDNKKPSEG 358
           K G    +F++ +LI+ +SS   V  A  +F+ +P   ++VV W ++IS Y+ + +    
Sbjct: 155 KLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELA 214

Query: 359 IGLFREML-VGDVEPDQVTYTVALSACANLGALDVGE 466
           + +F E+L  G + PD+VT   ALS C  LG LD+G+
Sbjct: 215 LKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGK 251



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
 Frame = +2

Query: 14  LKNYLNSKLYTKALLLFANLLTKDTSLIDSYSILYVIKVCTRKGLVTEGKQIHGIAVKFG 193
           +  Y  S L+ +A+ LF  +     +  D+ +I  V+  C   G + +G+ IH    +  
Sbjct: 304 IAGYAQSDLFKEAIELFREMQIGGFAA-DAATIACVLSACGHWGALAQGRWIHLYCERNS 362

Query: 194 YEPIIFLRTSLINMYSSLANVADAHQMFEEIPTKNVVCWTALISAYVDNKKPSEGIGLFR 373
            E  +  R +LI MYS   ++  A ++F  +   ++  W+A+IS    N +  + + LF 
Sbjct: 363 IEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFS 422

Query: 374 EM-LVGDVEPDQVTYTVALSACANLGALDVG 463
           +M ++ D+ P+++T+   L AC + G +D G
Sbjct: 423 QMEMISDIRPNEITFLGVLCACNHGGFVDKG 453